Gene Sked_12370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_12370 
Symbol 
ID8632873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1412516 
End bp1413268 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content71% 
IMG OID 
Productpredicted branched-chain amino acid permease (azaleucine resistance) 
Protein accessionYP_003314013 
Protein GI269794558 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCACCCC CGCCCGCCGA CCCGTCCTCC CCGTCGGGAG ACCACCCGCA CCCGGTCCGG 
CCCTTCCCGG CAGCGGTCCG CGACACCATC TCCGTGGGGG TCGCGCTCGT GCCGCTCGGG
ATCGCCTTCG GGCTGCTCGT CGTCGAGGCT GGGCTCTCGT GGTGGTGGGC GCCGCTGTTC
TCGACGTTCA TCTACGCCGG GTCGCTCGAG TTCCTCGCGA TCGGGCTCGT CATGGCGGCG
ACGCCGTTGG CGAGCATCGC GCTGTCGACC GTGCTGGTGA ACTTCCGGCA CGTGTTCTAC
GCGCTGTCCT TCCCACTGCA CTCCGTCCGC GGACCCGTCG CCAAGACCTA CAGCATGTAC
GCCCTCACCG ACGAGGCCTA CGCGCTCGCC CACCACATCC CCGAGGCCGA GCGGACCACC
GCTCGCATCG TGTGGATGCA GGTGCTCTGC CAGTCCTACT GGGTGGTCGG CGGGGTCGCC
GGGGCGCTCC TCGGCAGCGC CCTGCCCCAG GTCCCGCAGG GGATGTGGTT CGCCCTGACC
GCGCTCTTCA CCGTGCTCGC CCTCGACGCC TTCCGTCAGA ACCGGGACGT GACCTCACCG
GTGCTGGCCA TCGGGTCGGC GCTCGTCGCG CTCCTCGTCG CGCACGACGA GATGCTCGTG
GTCGGCATGG TGCTGTTCCT CGTGGCGCTC ACCGTGAGGT TCTTCGTGCG GCGCGATCGT
GGGACCGGCG AGGCAGGTGA CGCCCGTGCC TAG
 
Protein sequence
MPPPPADPSS PSGDHPHPVR PFPAAVRDTI SVGVALVPLG IAFGLLVVEA GLSWWWAPLF 
STFIYAGSLE FLAIGLVMAA TPLASIALST VLVNFRHVFY ALSFPLHSVR GPVAKTYSMY
ALTDEAYALA HHIPEAERTT ARIVWMQVLC QSYWVVGGVA GALLGSALPQ VPQGMWFALT
ALFTVLALDA FRQNRDVTSP VLAIGSALVA LLVAHDEMLV VGMVLFLVAL TVRFFVRRDR
GTGEAGDARA