Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_10440 |
Symbol | |
ID | 8632680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 1213338 |
End bp | 1214561 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
Protein accession | YP_003313827 |
Protein GI | 269794372 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTCC TCGCAGCCAT GTCCGGCGGG GTGGACTCGG CGGTCGCCGC GGCGCGCATC GTCGACGCGG GCCACGAGGT GGTCGGCGTG CACATGGCGC TGTCCCGCAA CCGCAACCAG TTCCGCGAGG GCTCGCGCGG GTGCTGCTCG ATCGAGGACG CGGGCGACGC ACGTCGGGCC GCCGACGTGC TCGGCATCCC GTACTACGTG TGGGACCTCT CCGAGAAGTT CGAGGACACC GTCGTGGCCG ACTTCCTCTC GGAGTACGCA GCAGGCCGCA CCCCGAACCC GTGCGTGCGG TGCAACGAGC ACATCAAGTT CGAGGCGCTC CTCGACAAGG CGACCGCGCT CGGTTTCGAC GCGGTCGCGA CGGGCCACTA CGCCCAGGTG ATCACCTCGA CACGACCCGA CGGGAGCGAG CTGCGCGAGC TGCACCGCTC GCCGAACACG GCGAAGGACC AGTCGTACGT CCTCGCCGTC ATGGGGCCGG AGCGCCTGCG CCGCGCCATG TTCCCGCTCG GGGCCTTCGA GTCCAAGGAC GCGGTGCGCG CCGAGGCCGC CGCACGTGGG CTGAGCGTGT CGGCCAAGCC CGACTCCTAC GACATCTGCT TCGTCGCCGA CGGCGACACC AAGGGGTTCC TCCAGGAGCG CCTCGGGACC AAGACCGGCG ACATCGTCGA CGTCGACGGC ACCGTCCTCG GCGAGCACGA GGGTGCCTAC GCGTACACCG TCGGGCAGCG CAAGGGCCTG GCCATCGGGC GCCCGGCGGC TGACGGCAAG GCCCGGTACG TCCTCGACAT CCAGCCGGTG TCCAACACCG TGGTCGTCGG GCCGGCCGAG ATGCTCTCGG TCGACCGGAT CACCGGTGAC CAGAGCGTCT GGCTCGCCGA CGACGTCCTC GCCGCGCACG GAGCCGAGAC CGGCTCCACG GCCGCGGCTC CCTCGGGCTG GATCGACGCC GAGGTCCAGG TGCGGGCGCA CGGTGAGCCT GTCCCGGCCC GCGTGCGTGC CGTGCCCGAC GCCTCGGGCG CCACGGGCGG CATGGAGGTC GAGCTCGTCG GCGCGACGCT CCGCGGCGTC GCCGCGGGCC AGTCGCTCGT GGCCTACCTC GGCACCCGCG TCCTCGGGCA GTCGACGGTC GTGGCCTCCA CGCGCGCCGG ACGCGCCGAG ACGCAGCCGG CCCAGCAGAC CCAGCCCGCC ACGCAGCCGG CACGCTCCGC GTGA
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Protein sequence | MKVLAAMSGG VDSAVAAARI VDAGHEVVGV HMALSRNRNQ FREGSRGCCS IEDAGDARRA ADVLGIPYYV WDLSEKFEDT VVADFLSEYA AGRTPNPCVR CNEHIKFEAL LDKATALGFD AVATGHYAQV ITSTRPDGSE LRELHRSPNT AKDQSYVLAV MGPERLRRAM FPLGAFESKD AVRAEAAARG LSVSAKPDSY DICFVADGDT KGFLQERLGT KTGDIVDVDG TVLGEHEGAY AYTVGQRKGL AIGRPAADGK ARYVLDIQPV SNTVVVGPAE MLSVDRITGD QSVWLADDVL AAHGAETGST AAAPSGWIDA EVQVRAHGEP VPARVRAVPD ASGATGGMEV ELVGATLRGV AAGQSLVAYL GTRVLGQSTV VASTRAGRAE TQPAQQTQPA TQPARSA
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