| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_09880 |
|---|
| Symbol | |
|---|
| ID | 8632624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 1143323 |
|---|
| End bp | 1144390 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | L-threonine synthase |
|---|
| Protein accession | YP_003313771 |
|---|
| Protein GI | 269794316 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.704092 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCACG TGTGGCAAGG CATCATCCGC GAGTACGCCG ACCTGCTGCC CGAGCACCTC
ACCACGCACG TCGTCACCCT CGGCGAGGGC GGCACGCCCC TGGTCCCCGC CCCGGCGCTC
TCCGCGCTGA CCGGTGCGGA GGTCTTCCTC AAGGTCGAGG GCATGAACCC GACCGGGTCC
TTCAAGGACC GCGGCATGAC GACGGCCATC TCCGCGGCCG CGCACAAGGG TGCCCAGGCC
GTGGTGTGCG CCTCGACGGG CAACACCTCC GCCTCGGCCG CCGCCTACGC GACCGCCGCG
GGCATGACCT GCGCGGTCCT CGTGCCGGAC GGCAAGATCG CCATGGGCAA GCTGAGCCAG
GCCATCGCGC ACGGGGCGAA GCTCCTCCAG GTGGACGGCA ACTTCGACGA CTGCCTCGTG
GCCGCCCGCA AGCTCGCCGA GGCGTACCCG GTCGAGCTCG TGAACTCCGT CAACCCCGAC
CGCATCCAGG GCCAGAAGAC GGGCTCCTTC GAGGTCGTCG ACGTGCTCGG CGACGCACCG
ACCATCCACG CGCTGCCCGT CGGCAACGCC GGCAACATCA CCGCGTACTG GAAGGGCTAC
GTCGAGTACC TCGAGGCGGG GATCTCGACG CACCTGCCGC AGATGTGGGG CTTCCAGGCG
GCAGGTGCCG CCCCGATCGT CGCCGGGCAC CCGATCACCG AGCCCGAGAC CATCGCCACG
GCCATCCGCA TCGGCAACCC CGCGTCGTGG GAGCAGGCCG TCGAGGCCCG CGACACGTCG
AAGGGCGTCA TCGAGTCGGT CACCGACGAG CAGATCCTCC TCGCGCACCG CATCCTCTCC
GCCGAGGTCG GCGTCTTCGT CGAGCCTGCG TCGGCGGCCG GCGTCGCCGG GATCATCTCC
CGTGCCGAGC GCGGGCTGGT GCCCGCCGGT GCCCGGATCG TCGTGACCGT CACCGGGCAC
GGCCTCAAGG ACCCGCAGTG GGCGCTGCGC ACCGCGGACG GCTCGGAGAT CGTGCCGCAG
CGCGTGACCG CCGACGTGGT CTCGATCGCC GACGCCCTCG GTCTCTGA
|
|---|
| Protein sequence | MAHVWQGIIR EYADLLPEHL TTHVVTLGEG GTPLVPAPAL SALTGAEVFL KVEGMNPTGS
FKDRGMTTAI SAAAHKGAQA VVCASTGNTS ASAAAYATAA GMTCAVLVPD GKIAMGKLSQ
AIAHGAKLLQ VDGNFDDCLV AARKLAEAYP VELVNSVNPD RIQGQKTGSF EVVDVLGDAP
TIHALPVGNA GNITAYWKGY VEYLEAGIST HLPQMWGFQA AGAAPIVAGH PITEPETIAT
AIRIGNPASW EQAVEARDTS KGVIESVTDE QILLAHRILS AEVGVFVEPA SAAGVAGIIS
RAERGLVPAG ARIVVTVTGH GLKDPQWALR TADGSEIVPQ RVTADVVSIA DALGL
|
|---|
| |