| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_09580 |
|---|
| Symbol | |
|---|
| ID | 8632594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 1107159 |
|---|
| End bp | 1107893 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain |
|---|
| Protein accession | YP_003313742 |
|---|
| Protein GI | 269794287 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.132168 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCCA TCTCACCGCG CCCGGACAGC CCCTCAGCAG GGGCCTCGAT CCTCATCGTC
GAGGACGAGC CTGCGATCGC GACCGCGATC GCCCAACGAC TGGGCGCCGA GGGGTGGCGC
ACGGAGGTCG CCCGCGACGG GCTCAGCGGC GTCGAGGCCG CCGCACGCAT GCTCCCGGAC
GCCGTGGTGC TCGACGTGAT GCTCCCCGGC ATCGACGGGC TCGAGGTGTG CCGCCGCATC
CAGGCAGAGC GCCCCGTCCC GATCCTCATG CTCACCGCTC GCGACGACGA GACCGACATG
CTCATCGGGC TCGGGGTCGG CGCCGACGAC TACATGACCA AGCCGTTCTC GATGCGCGAG
CTCGTCGCGC GTCTCAAGGC CCTGCTGCGC CGGGTCGACC GCGCCGCGCA GGCCTCGTCG
GCGCCCGACG GTGCCGAGCC GCCGATGGTC ATCGGCGACG TGGTGATCGA CCGTGCCCAG
CGCCGGGTGC ACCGTGCCGA GCAGGAGATC CACCTCACCC CGACGGAGTT CGAGCTGCTC
GTGATGCTCG CGAGCTCTCC GAAGACCGTG CAGACCCGCG AGCGCCTGCT CGCCGAGGTC
TGGGACTGGG CCGACGCGAG CGGGACCCGC ACCGTCGACT CCCACATCAA GGCGCTGCGC
CGCAAGCTCG GCGCGGACCT CATCCGCACG GTGCACGGGG TGGGCTACGC CTTCGAGCCG
CCTGCGAGCG CCTGA
|
|---|
| Protein sequence | MSAISPRPDS PSAGASILIV EDEPAIATAI AQRLGAEGWR TEVARDGLSG VEAAARMLPD
AVVLDVMLPG IDGLEVCRRI QAERPVPILM LTARDDETDM LIGLGVGADD YMTKPFSMRE
LVARLKALLR RVDRAAQASS APDGAEPPMV IGDVVIDRAQ RRVHRAEQEI HLTPTEFELL
VMLASSPKTV QTRERLLAEV WDWADASGTR TVDSHIKALR RKLGADLIRT VHGVGYAFEP
PASA
|
|---|
| |