Gene Sked_08580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_08580 
Symbol 
ID8632494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp974090 
End bp975280 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content73% 
IMG OID 
Productcell envelope-related function transcriptional attenuator common domain protein 
Protein accessionYP_003313643 
Protein GI269794188 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.783991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.393457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCC GACGTTCGCT CCGAGACCTG CCCCGCCCTC CCCGCCAGCA CGCGGTGGCG 
CGACGCGGTG GCGGCGCCCT CCGGGTGGTC GCTCTCTCCG TCACCGGAGC CCTGACCTTC
ACCACCGTCG GCGCGGCCGC CGTGGTCCAC ATGCTCGACT CGAACATCGA GACGCTCGAC
GTGGACCACC TCGCGAGCCC CGACCGGCCC GAGCTCCTCG AGCCCGAGGA CCCCTTCGGC
CGTCAGCCGG TCAACGTGCT GCTCGCCGGG TCCGACGAGC GCCTCGGCGA CAACGCCGCC
TTCGGCGAGG ACGAGGACGG CATGCGGTCC GACACGACCA TGCTCATCCA CGTGTCGGCC
GACAGGACGC GGGTCGAGTC GGTGTCCATC CCGCGCGACT CCCTGGTCGA CATCCCCGAG
TGCCAGACCA CCAACGGCCC CGTGCCGCCG CGCCGGCAGG CGATGTTCAA CAGCGCGATG
GCCGCCGCCT GGGACAAGGG CCAGGACCAC GAGTCGGCGA TCGCCTGCCT GCGGGACACC
GTCGAGTCGC TCACAGGGGT GCGGGTCACG GAGTTCGTGC TGCTCGACTT CGTCGGCTTC
GTCGCCATGG TCGACGCGCT CGGCGGCATC CCGATGGACC TGCCCGAGCC GATCGTCTCG
CCCAAGGCGG ACCTCGAGCT CGAGGCCGGC CCGCAGGTCC TCGACGGCCA CCAGGCGCTC
GGGTACGTGC GCGCCCGCAC CGGAGCCGGG CTGGACGGCT CCGACCTCTC CCGGATCGGC
CGGCAGCAGG AGCTGGTCAC GGCGATGCTC GACCAGGTCC TCAGCACCGA CCTCATGACG
AGCACACCGT CGCTCCTGCG GTTCCTCGAC GCCGCGACGT CGTCCATCAT GACGAGCCCG
GGCCTGGACT CCGTCTGGGA GATCGCCGGC CTCGCGCACT CGCTCCGCGG CGTCCCCCTC
GACGACGTCA CGCTCGTGAC CGTGCCGACG ACGGTCGCCC CGCAGGACCG GAACCGTGTG
GTCTGGACCG AGGAGGCCGA CGAGCTCTGG CGCCGCATGG CGGCCGACGA GCCGATCGTC
GACGTGGCAC CGAACCCCTC TGAGCAGGGG TCGGAGGTGC CGGGTGAACC TGCGCCCGGG
GCGCACGCCA CGCCCCTCGG AGCACGCGAC GGGCAGGTCC TGGTCCCGTA G
 
Protein sequence
MQTRRSLRDL PRPPRQHAVA RRGGGALRVV ALSVTGALTF TTVGAAAVVH MLDSNIETLD 
VDHLASPDRP ELLEPEDPFG RQPVNVLLAG SDERLGDNAA FGEDEDGMRS DTTMLIHVSA
DRTRVESVSI PRDSLVDIPE CQTTNGPVPP RRQAMFNSAM AAAWDKGQDH ESAIACLRDT
VESLTGVRVT EFVLLDFVGF VAMVDALGGI PMDLPEPIVS PKADLELEAG PQVLDGHQAL
GYVRARTGAG LDGSDLSRIG RQQELVTAML DQVLSTDLMT STPSLLRFLD AATSSIMTSP
GLDSVWEIAG LAHSLRGVPL DDVTLVTVPT TVAPQDRNRV VWTEEADELW RRMAADEPIV
DVAPNPSEQG SEVPGEPAPG AHATPLGARD GQVLVP