| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_08360 |
|---|
| Symbol | |
|---|
| ID | 8632472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 947174 |
|---|
| End bp | 948553 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | glutamate dehydrogenase/leucine dehydrogenase |
|---|
| Protein accession | YP_003313621 |
|---|
| Protein GI | 269794166 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0598327 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACCC AGAACACGGC AGCGGCAGCC CACGACACCG AGCAGCAGGA CGACAGCCCC
GAGCAGCGCC CAGGCAGCAG CTCGCCCGAG AGGCCACCGG TGGCGTCCGC ACGGCCAGGC
CTCGCCGTGC CGGCGACCGC GTCCGTCCCC TGGGCCAACG CCCTGGGCCA GCTCGCCGGT
GCCGTGGAGA TCCTCGGCTA CGAGGAGGGC CTCCACGAGA TGCTCGCCAC GCCCCGCCGC
GAGATCAACG TGGCCGTGCC GCTGCGACGC GACGACGGCC GGGTCGAGCT GTTCAAGGGC
TTCCGGGTGC AGCACAACGT CTCGCGCGGG CCGGGCAAGG GCGGGCTGCG GTTCCACCCG
AGCGTCGACG CCGACGAGGT TCGCGCGCTC GCCATGCTCA TGACGTGGAA GTGTGCCGTC
GTCGACCTGC CCTACGGCGG TGCCAAGGGC GGCGTCGGCA TCGACCCCGC CGGCTACAGC
GAGCGCGAGC TCGAGCGCGT CACCCGTCGC TACACCAGCG AGATCATGCC GATGATCGGC
CCCGAGCGCG ACATCATGGC ACCCGACATG GGCACCAGCG AGAAGACCAT GGCCTGGGTC
ATGGACACGT ACTCCGTGAG CCAGGGCTAC ACCATCCCCG GCGTCGTGAC CGGCAAGCCG
CTCGCCGTCG GAGGCTCCCT CGGGCGCGCC ACCGCCACCT CGCGAGGCGT CGTGCACGTG
ACCATCTCGG CGCTCGCCGA GGTCGGCGAG GAGGTCACCG GCGCGACCGT CGCGATCCAG
GGCTTCGGCA AGGTCGGCGC CCACGCCGCG TCGATCTTCG CCGAGGAGGG CGCCCGGGTG
GTCGCCGTGA GCGACCAGTT CGGCGGGCTG CACAACGCCG CCGGCATCGA CGTCCCGCGC
CTCCTCGACC ACGTCGCCGC CACCGGGTCG GTCGTCGGCT TCGAGGGCGC CGACCCCGTC
GACAACGACA CGCTCCTCGC GCTCGAGGTC GACGTGCTCG TCCCCGCCGC CATCGACGGC
GTCCTGGACT CCCGGACCGC CCCGACCGTC CGGGCCCGGT TCGTGGTCGA GGGCGCCAAC
GGCCCGACCA CCGCAGACGC CGACCGGATC CTCGCGGCCA AGGGCGTCGT GGTCGTCCCC
GACATCCTCG CCAACGCCGG CGGTGTGGTC GTCTCGTACT TCGAGTGGGT CCAGTCCAAC
CAGACGTACT GGTGGGACGC CAACGAGATC GAGCAGAAGC TCGCCGACCG CATGCACTCG
GCCTTCCGCG AGGTCGCCGC GACCTCGCGC GCCCAGGGCA TCACGCTGCG CGACGCAGCG
CTGGTCATCG GCGTGCGACG CGTCGCCGAG GCGCACCAGA TCCGCGGCCT CTACCCCTGA
|
|---|
| Protein sequence | MSTQNTAAAA HDTEQQDDSP EQRPGSSSPE RPPVASARPG LAVPATASVP WANALGQLAG
AVEILGYEEG LHEMLATPRR EINVAVPLRR DDGRVELFKG FRVQHNVSRG PGKGGLRFHP
SVDADEVRAL AMLMTWKCAV VDLPYGGAKG GVGIDPAGYS ERELERVTRR YTSEIMPMIG
PERDIMAPDM GTSEKTMAWV MDTYSVSQGY TIPGVVTGKP LAVGGSLGRA TATSRGVVHV
TISALAEVGE EVTGATVAIQ GFGKVGAHAA SIFAEEGARV VAVSDQFGGL HNAAGIDVPR
LLDHVAATGS VVGFEGADPV DNDTLLALEV DVLVPAAIDG VLDSRTAPTV RARFVVEGAN
GPTTADADRI LAAKGVVVVP DILANAGGVV VSYFEWVQSN QTYWWDANEI EQKLADRMHS
AFREVAATSR AQGITLRDAA LVIGVRRVAE AHQIRGLYP
|
|---|
| |