Gene Sked_08300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_08300 
Symbol 
ID8632466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp939125 
End bp940498 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content76% 
IMG OID 
Productpredicted amino acid aldolase or racemase 
Protein accessionYP_003313615 
Protein GI269794160 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.711035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0558619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGT CACCCCGCGC CACCCCGGTC GGCCCCCGGA CCAAGGGCCT CGCGCTCCAG 
GGGCCCTCGT CCCTCGAGCA GGTCGCCGCG GCGCACCCCA CCATCACGGC CGACACGTTC
TCCTGGCCGC TGCTGACCCT CGACGACGCC GCCCTCGAGC ACAACCTCTC GACGATGGCC
GAGATCTGCC GCGCGGCCGG GGTGCAGCAC GCGCCGCACG TCAAGACGAC CATGTCGCCC
CAGCTCTACG CGCGGCAGGT GGCGCACGGC GCGTGGGGCG CGACGGTCGC GAACCCCGCG
CAGCTGCGCA CCGTCGTCGA CTGGGGCGCA CGGCGGGTGT TCCTCGCCAA CGAGCTGGTC
GACCCGCGCG AGACGGCCGC GTTGCGCCAC CTGCTCGACG CCGGCGCCGG TGCGGGTCCG
GGTGTGGACG CGGGGACCGG TGTCGCTGAC GGTCTGACCG ACGGGCAGGC CCTCGAGGTG
TGGCTCTACG TGGACTCTGC CGTCGGCGTC CAGCGCCTCG AGGCGGCTTT CGCCGACGCC
GACCCGCAGG TACGTGCGCG GCTCGGTGTG CTCGTCGAGG TCGGTGTGGC TGGCGGGCGC
ACCGGCGTCC GCGGCCCGGC ACAGGCCCTC GCCGTCGCCC GGGCCGTCGA CGCCGCGGGC
CTGCGCCTGG TCGGCGTGGC GGGCTACGAG GGCTCGGCCG CCGGCGGCAC GAGCCCCGAC
GAGCTGGCGC GCGTCGCCGC CTTCTGCCGC TCGCTGCGCC ACGTCGCCGG GATGCTGCTG
TCCGAGGGGC TCCTCGGTCG CGACGGCACG CCCGTGGTCG TGTCGGCGGG CGGCAGCTCC
TTCCTCGACG TGGTGGTCGC CGAGCTCCCC GGCGACCTGA CCGGGCCCGA CGGCGCGGCG
GTCCCGGTCG ACGTCGTCGT CCGCTCGGGG GCGTACGTGA CGCACGACCA CGGGTTCTGC
GAGCGCATGG ACCCGTGGCG GCGCATCCCC GGTGCGTCCC CGATGCAGGC CGCGGCCGTC
GTCTGGGCGC AGGTGCTCTC GACCCCCGAG CCCGGTCTCG TGATCGTCGG CGCCGGGCGC
CGAGACCTCG CCTACGACCT CGACCTCCCC GTCGCGCTCT CGGTCCGCCG CGCCGACGCC
CGCGGCACGC TCGCCCCGCC GGTCCCGCTC GACGACGCGA CGGTCACCGC CCTCAACGAC
CAGCACCTGT TCCTCACGGT CGAGCCCGCT GCGGGGAGCG CCCCGGCTCT CGCGCCGGGT
GACGTCGTCG GGCTCGGGAT CTCGCACCCC TGCACGCTGT TCGACAAGTG GCGGTTGGCG
GCCGTCGTCG ACGCAGACGA CCACGTGGTC GAGCTCGTCA CGACAGACTT CTGA
 
Protein sequence
MTESPRATPV GPRTKGLALQ GPSSLEQVAA AHPTITADTF SWPLLTLDDA ALEHNLSTMA 
EICRAAGVQH APHVKTTMSP QLYARQVAHG AWGATVANPA QLRTVVDWGA RRVFLANELV
DPRETAALRH LLDAGAGAGP GVDAGTGVAD GLTDGQALEV WLYVDSAVGV QRLEAAFADA
DPQVRARLGV LVEVGVAGGR TGVRGPAQAL AVARAVDAAG LRLVGVAGYE GSAAGGTSPD
ELARVAAFCR SLRHVAGMLL SEGLLGRDGT PVVVSAGGSS FLDVVVAELP GDLTGPDGAA
VPVDVVVRSG AYVTHDHGFC ERMDPWRRIP GASPMQAAAV VWAQVLSTPE PGLVIVGAGR
RDLAYDLDLP VALSVRRADA RGTLAPPVPL DDATVTALND QHLFLTVEPA AGSAPALAPG
DVVGLGISHP CTLFDKWRLA AVVDADDHVV ELVTTDF