Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_08260 |
Symbol | |
ID | 8632462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 935584 |
End bp | 936372 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | predicted membrane protein, hemolysin III |
Protein accession | YP_003313611 |
Protein GI | 269794156 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0484863 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGA CCTCCCAGGC ACCCGCCCCC GGTCCGTCGG ACAGCCCCGT GGGCGGCCCG ACGGGCGCAC GCGACGCTGC GAGGCACGAC GAGCACGACG GGCCTGACAG CCCGCTCGAG CGCGTCGCCG AGGCGGCCGA GGCCGTCGTC GACGCCATCA AGCCCCGCCT GCGGGGCTGG ATCCACGCCG GGACCTTCCC CGTGGTGGTC GTCGCGAGCA TCCTGCTGGT CGTCCTGGCC CCGCCGGTCG CCGGCAAGGT GTCGACCGCG GTCTTCGGCT TCACCGCGAT CCTGCTGTTC GGGACCTCGG CGGTGTACCA CCGCGGCAAC TGGTCACCCC GGGTGCACGC GGCGCTGCGC CGGGCCGACC ACTCCAACAT CTTCCTCATC ATCGCCGGGA CCTGCACGCC CCTCGCGGTC CTGCTGCTGC CGAAGCCCTC GGCGATCACG CTCCTCGTCA CCGTGTGGGC CGGGGCGCTG CTGGGCCTGG CCGCCCGGAT GATCTGGATC GGTGCCCCGC GGTGGGTCTA CGTGCCCGTC TACATCGCGC TCGGGTGGGT CGCGGTCTTC TACATGCCGC AGTTCGCGAG CAACGGCAGC CCTGCGATCG TCTGGCTCGT GGCGATCGGC GGGCTGGCGT ACAGCGTCGG CGCGGTGGTC TACGGCCTCA AGCGCCCGAA CCCGAGCCCG CAGTGGTTCG GGTTCCACGA GATCTTCCAC GTGCTCACCG TGGTCGGCTA CGGCTGCCAC TACGCGGCCA TCCTCGTCGC GGTCCTCATC GTCCGCTGA
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Protein sequence | MAKTSQAPAP GPSDSPVGGP TGARDAARHD EHDGPDSPLE RVAEAAEAVV DAIKPRLRGW IHAGTFPVVV VASILLVVLA PPVAGKVSTA VFGFTAILLF GTSAVYHRGN WSPRVHAALR RADHSNIFLI IAGTCTPLAV LLLPKPSAIT LLVTVWAGAL LGLAARMIWI GAPRWVYVPV YIALGWVAVF YMPQFASNGS PAIVWLVAIG GLAYSVGAVV YGLKRPNPSP QWFGFHEIFH VLTVVGYGCH YAAILVAVLI VR
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