Gene Sked_08260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_08260 
Symbol 
ID8632462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp935584 
End bp936372 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content72% 
IMG OID 
Productpredicted membrane protein, hemolysin III 
Protein accessionYP_003313611 
Protein GI269794156 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0484863 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGA CCTCCCAGGC ACCCGCCCCC GGTCCGTCGG ACAGCCCCGT GGGCGGCCCG 
ACGGGCGCAC GCGACGCTGC GAGGCACGAC GAGCACGACG GGCCTGACAG CCCGCTCGAG
CGCGTCGCCG AGGCGGCCGA GGCCGTCGTC GACGCCATCA AGCCCCGCCT GCGGGGCTGG
ATCCACGCCG GGACCTTCCC CGTGGTGGTC GTCGCGAGCA TCCTGCTGGT CGTCCTGGCC
CCGCCGGTCG CCGGCAAGGT GTCGACCGCG GTCTTCGGCT TCACCGCGAT CCTGCTGTTC
GGGACCTCGG CGGTGTACCA CCGCGGCAAC TGGTCACCCC GGGTGCACGC GGCGCTGCGC
CGGGCCGACC ACTCCAACAT CTTCCTCATC ATCGCCGGGA CCTGCACGCC CCTCGCGGTC
CTGCTGCTGC CGAAGCCCTC GGCGATCACG CTCCTCGTCA CCGTGTGGGC CGGGGCGCTG
CTGGGCCTGG CCGCCCGGAT GATCTGGATC GGTGCCCCGC GGTGGGTCTA CGTGCCCGTC
TACATCGCGC TCGGGTGGGT CGCGGTCTTC TACATGCCGC AGTTCGCGAG CAACGGCAGC
CCTGCGATCG TCTGGCTCGT GGCGATCGGC GGGCTGGCGT ACAGCGTCGG CGCGGTGGTC
TACGGCCTCA AGCGCCCGAA CCCGAGCCCG CAGTGGTTCG GGTTCCACGA GATCTTCCAC
GTGCTCACCG TGGTCGGCTA CGGCTGCCAC TACGCGGCCA TCCTCGTCGC GGTCCTCATC
GTCCGCTGA
 
Protein sequence
MAKTSQAPAP GPSDSPVGGP TGARDAARHD EHDGPDSPLE RVAEAAEAVV DAIKPRLRGW 
IHAGTFPVVV VASILLVVLA PPVAGKVSTA VFGFTAILLF GTSAVYHRGN WSPRVHAALR
RADHSNIFLI IAGTCTPLAV LLLPKPSAIT LLVTVWAGAL LGLAARMIWI GAPRWVYVPV
YIALGWVAVF YMPQFASNGS PAIVWLVAIG GLAYSVGAVV YGLKRPNPSP QWFGFHEIFH
VLTVVGYGCH YAAILVAVLI VR