Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_08080 |
Symbol | |
ID | 8632444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 918133 |
End bp | 919842 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | signal transduction histidine kinase |
Protein accession | YP_003313593 |
Protein GI | 269794138 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.672311 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.194133 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCAGGA CCGCAGTCGC GGCAGAGCAC GGCCCGACCA TCTCCCGGTG GTCGCAGGCC CTCGCCACCC GGGTGGGGCG CTCGGCGCGC GGTCCGCTGC TCACCCTCCA GATCCCGCTC GCGGCGACCG TCTCCCTCGT GGTGCTGCTC TTCGCGGCGA CCGCGCACCG TTACCTCACC ACACCGACCT TCGCGCTGGG CGTGGCCCTG GTCTTCGGCG GCTGCGCGTA CGCGCGCTGG GCGCCGGCCG CGCGCACCAA CCACCGCTGG GCTCCCGTCG TGGTGTGCCT GGTGGACTTC ACGGCCATCG GGCTGCTGCG GTACGGCACG CACATGGAGT TCGGCGTGCT CGGGGTGCTC TCCGTGTTCC CCGCCGCCTG GCTCGCGCAC ACCTACCTGT GGCGTGGCGC GGCGCTGGCG ACCGTCTCGA CCATCGCGGT GACCATCGTC CCCGAGCTCG CGTCGGCGGT CGCCCTCAAC CTCCACGTGG GGGTCCGGGT CCTGCTGCTG CCGCTCATCG TCGCGGTCGT CACCGTGGCG GTCGTGGTCA TCACCGAGCA CACCTCCCAC CAGGAGCGCG TGCTGCAGCG CGAGCACGCC CGCCTCGACG CGGCTCTCAC CGAGAGCGAG TCGACGTCGC TGCTGCTCGA CGCGATGCTC GAGTCCCTCG ACACCGGCCT GCTGGCGGTC GACTCCGCCG GCAAGATCAT CCGCGCCAAC ACGACCGACC GTGACCTCTA CGCGCTGACC CTGCCGTCGG ACGACGGGAC GTCCGGCGCC CGCGCCGTGT TCGCTGCGGA CCGCACCTCG CCCCTCACCC GGGAGAAGAT CCCGTCGGAG ATGGCGCGCC GCGGCGAGGG CGCCACCGGG CAGCTCATGT GGCTCGGGCT GCCGAGCGGA CCGCAGCGGG CGATCTCCGC GAACATCGTG CGCATCGTCG ACTCGGGCGG CGTCGACCGC GGTGCCCTGG TGGCGTCGCA CGACGTCACC GAGCTCATGG AGGCTATCGA GACCAAGGAC CGGTTCGTCG GGACCGTCTC GCACGAGCTC CGCACCCCTC TCACCTCGAT CATGGGCTAC CTCGAGCTCA TCGCGGAGGA CGACTCGACG GGTGACAACC CGCTCTCGGA GGAGACCCGG GAGTACGTGG GGATCGCGCG CCGCAACGCC GAGCAGCTGC TGTCGCTCGT GTCCGACCTG CTCACCACCG CGCAGATCGA CTCGGGGGCA CTGCGCCTGA CCACCGACGT GACGACCCTC AGCAGCCTGG TGGCGGACGC CGTCGAGGCC GCACGGCCGC GCTTCGTCGA GGCGGGGATC ACCCTCACGT CGACGGTGGT GCCGACCGTC GTCCAGGACG TCGACCGCCG CCGGATGGCG CAGGTCATCG AGAACCTCCT GTCGAACGCC CTCAAGTACA CCCCGGCAGG CGGGACCGTG ACGGTCACGA CGTCGACCGT GCTCGGCTCG TCGGTCATGA CCGTGAGCGA CACCGGCATC GGCATGAGCC GGGCCGACCT GGGCAAGATG TTCACCAAGT TCTTCCGCGC CGAGTCCGCC CGCACGGCCC GCATCCAGGG CTTCGGCCTG GGGCTCGTCA TCTGCCGGGC GATCGTCGAG GCGCACGGCG GCAAGCTCCG CATCGACAGC ACCCTCGGTC GCGGGACCAA GGTCAGCGCC GTCCTGCCGG TCGGGGTCAC CGAGGACTGA
|
Protein sequence | MSRTAVAAEH GPTISRWSQA LATRVGRSAR GPLLTLQIPL AATVSLVVLL FAATAHRYLT TPTFALGVAL VFGGCAYARW APAARTNHRW APVVVCLVDF TAIGLLRYGT HMEFGVLGVL SVFPAAWLAH TYLWRGAALA TVSTIAVTIV PELASAVALN LHVGVRVLLL PLIVAVVTVA VVVITEHTSH QERVLQREHA RLDAALTESE STSLLLDAML ESLDTGLLAV DSAGKIIRAN TTDRDLYALT LPSDDGTSGA RAVFAADRTS PLTREKIPSE MARRGEGATG QLMWLGLPSG PQRAISANIV RIVDSGGVDR GALVASHDVT ELMEAIETKD RFVGTVSHEL RTPLTSIMGY LELIAEDDST GDNPLSEETR EYVGIARRNA EQLLSLVSDL LTTAQIDSGA LRLTTDVTTL SSLVADAVEA ARPRFVEAGI TLTSTVVPTV VQDVDRRRMA QVIENLLSNA LKYTPAGGTV TVTTSTVLGS SVMTVSDTGI GMSRADLGKM FTKFFRAESA RTARIQGFGL GLVICRAIVE AHGGKLRIDS TLGRGTKVSA VLPVGVTED
|
| |