Gene Sked_07880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_07880 
Symbol 
ID8632425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp899396 
End bp900457 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content74% 
IMG OID 
ProductPpx/GppA phosphatase 
Protein accessionYP_003313575 
Protein GI269794120 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.605483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.219584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGG CTGCACACCC TTCACCGCTC TCGTCCCCCG TCCTCTCGGC GCTCACCGGC 
CCCGCAGGCG ACGCCGACGC CCCTGCGGCC TCCGGGCCTG CACCGGGCTC TCGGCGGGTC
GCCGCGATCG ACTGCGGCAC CAACTCGATC CGCCTGCTCG TCGCGGACGT CGACACCGAG
GCCGGGACGC TCACGGACCT GGTCCGCGAG ATGGAGGTCG TCCGCCTCGG CCAGGGGGTC
GACCGCACAG GGCGCCTGGC GCCCGAGGCG CTCGAGCGCA CCCTCGAGGC CACCCGGCGC
TACGCCGAGA CCTGCCGCGA ACTCGGCGCC GAGCGTGTGC GCTTCGTCGC GACGTCGGCG
TCGCGCGACG CCGAGAACCG CCAGGACTTC GTCGACGGTG TCGTCGCCGC GATCGGCGTC
GAGCCCGAGG TGATCTCCGG TGACGAAGAG GCCGAGCTGA GCTTCCGTGG GGCCACGAGC
GTGCTCGGTG CGGGTCACAC GGCCCCCTAC CTCGTGGTCG ACCTCGGTGG TGGCTCGACC
GAGGTGGTGC TCGGCACCGA CGCACCCGAG GCGGCGCGCT CCATGGACGT CGGGTGCGTC
CGCATGACCG AGCGGCACCT GACCCCGGAC CCGCCGACGG CCGAGCAGGT CGAGGCCGCC
CGGGCCGACG TCCGTGCCGC GCTCGACTCG GCTGCCGAGG TGGTCCCGCT CGGCAGGGCC
GGAACCCTCG TCGGCCTCGC CGGGACGGTC ACCACGGTGA CGGCTCACGC CCTCGGGCTG
GAGCGTTACG ACCGCGACCG CATCAACGGC TCGGTGCTCA CCGTCGAGCA GACGCTCGCG
GCGTGCGACG ACCTGCTGGC CCGCTCGCGC GACGAGCGCG CCTCGCTCGG CTTCATGCAC
CCGGGACGGG TCGACGTCAT CGCCGCCGGG GCGCTCGTCT GGTCCGAGGT GGTCCGGCGG
GTGCGCGACG AGGTCGCCGC CGCCGGGGGA GAGCTCACCG AGGTGGTCAC GAGCGAGCAC
GACATCCTCG ACGGCATCGC CTGGAGCGTC GCCCAGGGCT GA
 
Protein sequence
MTSAAHPSPL SSPVLSALTG PAGDADAPAA SGPAPGSRRV AAIDCGTNSI RLLVADVDTE 
AGTLTDLVRE MEVVRLGQGV DRTGRLAPEA LERTLEATRR YAETCRELGA ERVRFVATSA
SRDAENRQDF VDGVVAAIGV EPEVISGDEE AELSFRGATS VLGAGHTAPY LVVDLGGGST
EVVLGTDAPE AARSMDVGCV RMTERHLTPD PPTAEQVEAA RADVRAALDS AAEVVPLGRA
GTLVGLAGTV TTVTAHALGL ERYDRDRING SVLTVEQTLA ACDDLLARSR DERASLGFMH
PGRVDVIAAG ALVWSEVVRR VRDEVAAAGG ELTEVVTSEH DILDGIAWSV AQG