| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_06820 |
|---|
| Symbol | |
|---|
| ID | 8632319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 781346 |
|---|
| End bp | 783103 |
|---|
| Gene Length | 1758 bp |
|---|
| Protein Length | 585 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | glycerol-3-phosphate dehydrogenase |
|---|
| Protein accession | YP_003313476 |
|---|
| Protein GI | 269794021 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACCT CCGGAACGTC GTCCAAGCTC ACCCCGCAGA GCCGAGCGCA GTCGCTCGAC
GCCCTCCGCG CGAGCGCCGA GGGTGAACCT CTCGACGTCC TCGTCATCGG CGGAGGTGTC
ACCGGAGCCG GTATCGCCCT CGACGCCGTG ACCCGCGGCC TGACGACCGC GGTCGTCGAG
TCCCAGGACT GGGCCGCAGG CACCTCGAGC CGATCCAGCA AGCTCGTCCA CGGTGGCCTG
CGCTACCTGC AGATGCTCGA CTTCAACCTC GTGCACGAGG CACTGACCGA GCGCGACCTG
CTCATCAAGA AGCTGGCACC GCACCTCGTC AAGCCCGTCT CCTTCCTCTA CCCGCTCGAG
CACAGGGTCT GGGAGCGCGG GTACGTCGGC GCCGGCATCA TGCTCTACGA CACGCTCGCC
AGCCTCATCC CGGGCAAGCG CGCGCTGCCG TTCCACAAGC ACGTGTCCCG CAAGGGCATG
GAGCGCCTCT TCCCCGACCT GCGCCACGAC GCCGCGGTCG GCGCGGTCCG CTACTGGGAC
GGCTCCGTCG ACGACGCCCG CCTGGTCTCG ACCCTCATCC GCACCGCAGC CTCCTACGGC
GCGAGCGCAG CCACCCGCAC CCAGGTGGTC GAGCTCACCA AGGACTCCGG CGGACGCGTC
GACGGCGCGG TCCTCCAGGA CCTCGAGACC GGCGACACCT TCCCGGTCAA GGCCCGCAAC
GTCATCAACG CCACCGGCGT CTGGACCGAG GAGACCGAGG GTCTAGCCGG CGAGGAGGGC
GGCCTGCGGG TGCTCGCCTC CAAGGGCGTG CACATCGTCG TCCCGCGGGA GCGCATCAAG
GGCACCGTCG GGCTCATCCT GCAGACCGAG AAGAGCGTGC TCTTCGTGAT CCCGTGGTCG
CGCTACTGGG TCATCGGCAC CACGGACACC CCGTGGAAGC AGGAGCTCAA GCACCCCGTC
GCCACCGCCG CGGACATCGA GTACGTCCTC GACCACGCGA ACGCCGTCCT GGCAGACCCG
CTCACCAAGG ACGACATCAT CGGCACCTGG GCCGGCCTGC GGCCGCTGCT GCAGCCGGGC
ACCAAGGAGG GCACCTCGTC CGCCAAGGTC TCGCGCGAGC ACACCGTCGC CTCCCCCGCC
CCGGGCCTCA CGGTCATCGC CGGCGGAAAG CTCACCACCT ACCGCGTCAT GGCGGAGGAC
GCGGTGGACT TCGCGCTCGG CGACGGAGCC AAGGCCCGTC CGTCGATCAC CACCGAGGTG
CCGCTGCTCG GCGCCGTCGG GCTGGACGTC CAGCAGAACT GGGGACGCCG GCACGCACGC
ACCTACGGCT GGACCCCGGC ACTCGTCGAC CACCTGCTCC ACCGGTACGG CTCGCTGCTC
TCCGACATCG TCGAGCTCTG CGAGACCGAC CCGAGCATGT CCAAGCCGCT CGAGCACGCA
CCCGCGTACC TGCGTGCCGA GATCGCGTAC GCGGTGAGCC ACGAGGGGGT CCTGCACCTC
GAGGACATCC TGCTCCACCG CACACGCCTC AACTACGAGG TCGCCGACCG GGGCCTCGCG
GCCCTCGAGG AGATCTCGCA GATCGCCGCA GCCGGGCTCG GCTGGGACGA GGACACCCGA
CTCGCAGAGG TCGCTTCCTA CACGGCACGC GCCGAGGCAG AGGCCGCCGC AGAGCTCGAG
CCCGACGACG AGTCGGCCGA GCGCACTCGG CTCGCCGCCG CGGACGTCAG CCCGACGGCC
ACGCTCTCCC CCAGGTAG
|
|---|
| Protein sequence | MSTSGTSSKL TPQSRAQSLD ALRASAEGEP LDVLVIGGGV TGAGIALDAV TRGLTTAVVE
SQDWAAGTSS RSSKLVHGGL RYLQMLDFNL VHEALTERDL LIKKLAPHLV KPVSFLYPLE
HRVWERGYVG AGIMLYDTLA SLIPGKRALP FHKHVSRKGM ERLFPDLRHD AAVGAVRYWD
GSVDDARLVS TLIRTAASYG ASAATRTQVV ELTKDSGGRV DGAVLQDLET GDTFPVKARN
VINATGVWTE ETEGLAGEEG GLRVLASKGV HIVVPRERIK GTVGLILQTE KSVLFVIPWS
RYWVIGTTDT PWKQELKHPV ATAADIEYVL DHANAVLADP LTKDDIIGTW AGLRPLLQPG
TKEGTSSAKV SREHTVASPA PGLTVIAGGK LTTYRVMAED AVDFALGDGA KARPSITTEV
PLLGAVGLDV QQNWGRRHAR TYGWTPALVD HLLHRYGSLL SDIVELCETD PSMSKPLEHA
PAYLRAEIAY AVSHEGVLHL EDILLHRTRL NYEVADRGLA ALEEISQIAA AGLGWDEDTR
LAEVASYTAR AEAEAAAELE PDDESAERTR LAAADVSPTA TLSPR
|
|---|
| |