Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_06330 |
Symbol | |
ID | 8632270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 714089 |
End bp | 715195 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | carbohydrate ABC transporter membrane protein |
Protein accession | YP_003313427 |
Protein GI | 269793972 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGA CGCAGGACCG TCCGCAGACC CGGACGCCAC GCCCCCGGAA GAGCCGCACC CACGGCCGCG AGGCCGCGGC GGGCTGGCTG TTCATCTCCC CGATGCTGGT GCTGCTCGGG CTGTTCCTCG TCGTCCCCGT CCTCATGGCC GCGTGGGTGT CGGTGTCCGA CTGGTCGGGT CGCGGGAGCC CGTTCTCCTC CGACGTGAGC TTTGTCGGGA CCGACAACTA CAGCGCGCTG CTGTCCGAGC CCGGGCTCGC CCAGTCCGAC TTCGGACGGG CGCTGCGCAA CAACGGCTAC TACGTGCTGT TCGTCATTCC GCTGCAGACC GCCGTGTCGC TGTTCCTCGC CGTGATGGTC AACCGGCGGA TCCTGCGCGG GCGCGGGTTC TTCCGCACCG CCTTCTACTT CCCGTCCGTG ACGAGCTCGG TCGCCATCAC GGTGATCTTC CTCTTCCTGT TCTCGACCAC GGGAGCCGTC AACAAGGCGC TCTCGTGGCT GGGGGTCAAC GGGCCCAGCT GGTTCTCCGA CCCCGGCGGG ATCATCCACG TCGCGCTGCG CGGCCTCGGC GTCGACACGC CACCCGCGGC CCTCGCGGAG CACGGGCTGC TCGGCAACAG CTGGTGGGAC TGGCTGTCCG GCCCCAGCCC CGCGATGAGC GTATTCATCA TCATGGCGGT GTTCACCACG TCGGGGACCT TCATGCTGCT CTACGTCTCG GCCCTGCAGA ACATCCAGGG CGAGATCGAG GAGGCCGGGA TCATGGACGG CGCGAACGGC TGGCAGCGGT TCCGGAGCAT CACGCTCCCC ATGCTCAAGC CCACCACCTT CACGGTCCTG ACGCTGGGTC TCATCGGCAC GTGGCAGGTG TTCGACCAGA TCTACGTCGG GACGCAGGGC GGACCGGCCA AGACCACGCT GACGCCGGCG TACCTGTCGT ACACGTCGTC GTTCCAGAAC AACCAGTGGG GCCGCGGTGC CGCGATCGCC TTCGTGCTCT TCGCGATCAT CGTGACGATG ACCATCGTCC AGCGGATCCT GCTTCGCGAG CGCACGGCCG TGCCGCGGCG CCGCAGGTTC TACCCCGACG GGAAGGACGA GCGATGA
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Protein sequence | MTTTQDRPQT RTPRPRKSRT HGREAAAGWL FISPMLVLLG LFLVVPVLMA AWVSVSDWSG RGSPFSSDVS FVGTDNYSAL LSEPGLAQSD FGRALRNNGY YVLFVIPLQT AVSLFLAVMV NRRILRGRGF FRTAFYFPSV TSSVAITVIF LFLFSTTGAV NKALSWLGVN GPSWFSDPGG IIHVALRGLG VDTPPAALAE HGLLGNSWWD WLSGPSPAMS VFIIMAVFTT SGTFMLLYVS ALQNIQGEIE EAGIMDGANG WQRFRSITLP MLKPTTFTVL TLGLIGTWQV FDQIYVGTQG GPAKTTLTPA YLSYTSSFQN NQWGRGAAIA FVLFAIIVTM TIVQRILLRE RTAVPRRRRF YPDGKDER
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