| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_05620 |
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| Symbol | |
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| ID | 8632199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 628275 |
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| End bp | 634433 |
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| Gene Length | 6159 bp |
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| Protein Length | 2052 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | fibronectin type III domain-containing protein |
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| Protein accession | YP_003313356 |
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| Protein GI | 269793901 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.691963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.30022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCTCG GGCGCGGCGC CACGCGCGCC GAGCGTGCAC GGTCCACCTC GGCCGTCGTC
GCCGGCGTGA CCGTCCCGGC CGTGCTGGCG ATCATGGCCG TCATCGACCC GGGCGTGAAG
ATCGCCGAGG TCGACCTCAA CGACGGCGCC GTGTGGGTCA CCAACCGCTC CGAGCTCAAG
CTCGGCCGCT ACGACGCGAC CGTCAAGGAG CTCAACGGCG GGCTCGTGGC GACCGACCCG
TCCTTCGACG TGCTGCAGTC CGGTCAGGAC GTCCTGCTCT CCGAGCCCCG GATGCTCTCG
ACCGTCGACC CCGCGACCAT GGCGCTCTCC GCGCAGGCCG AGGTGCCCGC CGGCTCCACG
GTGGCCATGG GTGCGGGTGT CGTCGCGATC ACCTCGCCCG AGGGTTCCGT GTGGATCCGC
ACCATGACGA GCCTGGCCTC CGTCACGAGC GACACCCCCG GCGACCTCGA CCTCGGTGAC
GGGGCGCTCG CGACCGTCGA CCCCGACGGC CTCGTGCTCG CCCTCGACCC GACCGACGGC
ACCGTGCACC GGGGCGAGAT GGTCGACGGG ACCCTCGAGA TCACCGACGC CGGGACCCTC
GACGACGCCG CGGGCGTGCT GCCCGACGCC GTCACCGCGG TCGACGGCCG GCTCGTCATG
CTCGCGGGGA CCACACTGCA CGGCGACGGC TGGACCACCG AGGTGGTCGA CGGTGCCGCG
CCCGTGCTCC AGCAGTCCTC GTCGCAGGGC CCGGCCCTCG CGGTCGCGAC CACCAGCCAC
CTGCTCGAGG TCGACCTCGG CTCCGGGGAG GTCGAGGCGA CCCCCTCGAC CGGTCGCGGC
ACGCCCGCAG CGCCCGTGCG CGTGGGCGAG TGCGTCTACG GTGCCTGGGC CAGCCCGACC
GGCAGCTACC TCGTGCGCTG CGGCGACGGC GACCCGACGG TCCTCGACCT CGAGCGCATG
ACCGCGCAGA GCACGCCGGT GTTCCGCGTC AACCGCGCGG TCGTCGCCCT CAACGACACC
CTGCAGGGCA ACATGTGGCT GCCCGACGAG ATGCCGCGCG TCCAGGTGCC CAACTGGGAC
CAGATCGAGC AGGACGACGA CACCACGGAC ACCGAGGAGG AGTCCGACGA GGTCGAGTCC
ACCCAGCAGC AGCTCACCGA GTGCACCGCG CAGTCGGCCG CACCGGGTGC CGTCGACGAC
GACCTCGCCG TCCGCCCCGG GCGCTCGACC GTCCTCGAGG TCCTCAACAA CGACACCGCC
GGCGAGTGCG GCATCATCGC GATCAGCGAG CTCGACACGA GCGGCCTCGA CGAGGGCTTC
GCGGTGGTCG AGCCCGTGTT CGGCGGGCGC GCGCTCCAGG CCGTCGTGTC CCCGCAGGCC
CAGGGCAGCG CGCAGCTGAC CTACACGATC TCCGACGGCC GCGGCAACAG CCCGCCCTCG
ACAGCCACCG TGACGCTCAC CGCCGCCGAC CCCGGGAGCA ACTCGGCGCC GCTCGAGCTG
CGCACCGGGT CGGTCGAGCT CGAGCAGGGC GCGACCGTGG ACCACGACGT CCTCGCCGGG
TGGGTCGACC CCGACGGTGA CGAGCTCGTG CTCCTCGGCG CGGTCACCGA CGGGACCGCG
ACGGTCCGCG CGCGCCAGAA CGGCATGCTC ACCGTCACCG CCGAGGGCGA GGCCCTCGGC
CGCCAGACCG TCACCGTCGT GGTGAGCGAC GGCATCGAGC AGACCACCGG GCAGGTGACC
GTCGACGTCC GCGCGACCGG CTCGCTGGCG CCCCGCATCG ACCCGATCCA CGTGGTCACC
GAGGCCGGCA AGGACGTCGA GGTCGACGTC CTCGAGTCGG TCCACAGCCT CTCCCGCGAG
CCCGTGCGCC TCGCGAGCGT CGACGAGCCG CCCGGCACCA CCGTCGAGGC CACCCTCGAC
GACGGCACCT TCACCTTCAC CGCGACCAAC GCCGCCACGT ACTACGTGCC GTTCTCCGTG
GTCGCCTCGC CCCAGCAGGC GCAGGGCCTC GTCCGTGTCG ACGTCGTCGA GCCGACCACC
GAGCCGCAGC GCCCGGTCGC CGTGCGCGAC CTCGCGCCGC TGCCCCGCGG CGGCGAGGTG
ATCGTCGACC CGCTCGCCAA CGACGTCGAC CCCGCCGGCG GCGTCCTCGT GGTGACCTCC
GTCGCCGCGG TCGACGGCTC CGCGCTGCAG GCCGTGGTGG TCGACCACCG GTACGTCCGC
ATCAGCTCCC AGCGCGACCT CGCCGCCCCC GAGACCCTCG AGTACCGCGT GTCGAACGGC
CTCGAGGAGG TCTCCGGCGA GATCCTCGTG CAGCCCGTCG AGCCCACGGG CGAGGACCGC
CCGCCGGTCC TCCAGGACCT CGAGGCGTCG GTGCGCACCA CGGGCGTCGT GACGATCCCC
GTGCTCGACA GCGCCGTCGA CCCCGACGGC GACGTGATGT CGGTCGTCCC CGACCTGCTC
GAAGACCTCA GCCCCGAGCA GGGCCTGCTG TTCGCCTCGG GCGACGTGCT GCGCTTCCAG
GCGACCGGCA CCCCGGGCAT CGTGGAGACG ACGTACAGCG TCCAGGACAC CGGCGGGAAC
GTCACGACCG CCCGGCTGAC CATCTCGGTG CACGCCTCGG ACCCCGAGAC CAAGACCGCC
CCGCGGCCCC GCGCGCTCAC CGCGCGCACC TTCGACGGCG AGACCGTCCG CATCCCCGTG
CCGCTCACCG GCATCGACGA CGACGGCGAC GGCGTCACCC TCCTCGGCCA GGGCGACAGC
GTGCCCACCC TCGGGCGCAT CGTCGCCGTG GGGGCCGACT ACCTCGAGTA CGAGGCCTTC
CCCGGGTCCT CCGGCACCGA CTCGTTCCAG TACGCCGTCG AGGACTGGAC GGGGCAGCGC
GCCCAGGCGA CCGTCCGCGT CGGGATCTCC GCTCGCAGCG CGCAGGGACA GGCCATCGTC
GCCCGCAACG ACGAGGCGAC GGTCCGGCCC GGCCAGCGCG TCGAGGTCCG CGTGCTGCGC
AACGACGTCG ACCCCTCGGG CGGCGAGCTC ACCCTCGCCC CCGAGCTCGA GGTGCCCGAG
GGCATCGAGG CGCACGTCGA CAAGCGCCGT GTCGTGGTCA CCGCGCCTGA CCAGGCCACC
GAGCCGCTCT CCATCGTCTA CACCGTGACC AACGAGCTCG GTGCCACGGC CCGCGCGACC
CTGACCGTCT ACGTCGTCGA CGACGCGCCC ATCGCCCCGC CGATCGCCCG CGACGTCACG
GTGGCCCCGA TCGAGGTGGT CGACAAGACG AGCGTCGAGG TCGACGTGCT CGCCCTCGCC
GAGAACCCCT CCGGGCCGCT GAGCGACCTC GAGGTGCGGG TGCCGTCGTC GCACTCGGAC
GTCGCCCAGG TGGTCGCCGG CGACCGCGTG CTGGTCACCC TCACCGACCG CACCCAGAAC
ATCCCCTACC GCCTGGTCAA CACCCGGCCC GAGGCCGACG GCGCCGGCGC GTACGCCTTC
ATCACCGTGC CCGCCCTCGG CGACTTCCCG CCCACGCTGC GCCCCAAGAC GCGCGAGCTG
CGCGTGGCCT CCGGCGAGGA GCTCGAGATC TCCCTCGCCG AGTTCGTCCA GGTCGGCACC
GGCAAGACCG CGCGCGTCCG CGACGCCGAG CGGGTCTCGG CGACGAACTC CGACCAGAGC
GACCTCGTGG TCGACGACAC CACCCTCCGG TTCGTCTCGG CCCCCGGCTA CGCGGGCCCC
GCCTCGATCA CGGTCGAGGT CACCGACGGT GCCACCCGCG ACGACCAGGG CGCACGCCGC
TCGACGCTCA CGCTGCCCAT CACCGTGTTC ACCGAGGACG CCCGCCCGCC GACCTTCACG
CCGAGCGAGC TCCTCGTGCC GCAGGGCGAG TCCACGAGCG TCGACCTGCT CGGGTTCACC
CGTGGGCCCC AGGGAGCGTC GGCCGAGCAG AAGTACACCT ACGAGGTGGT CCAGGCGCCC
GGCAACGGGT TCCTCGCCTC GATCACCCCG GGCACCACGC GCCTCGCCGT GAGCGTCCCC
GCCGACGTCG CCCGCGGCAC CCTCGGCAGC GCGACCGTGC GCCTCGGCTA CGGGACCGAG
GGGACCATGG ACGTCCAGGT CACCTTCAAG GTCGCCGCGA GCTCGCGCCA GCTCGCCTCG
CTCATGGTCC ACGAGGCCGA GGGCGCCGCC GGTCGGGACA CCACGATCAA CGCGCTGGCC
GGGGCAGGCA ACCCCTTCAG CGAGCCGCTC ACGCTGCTCA GCGCCTCGCC GGTCGTCGCC
GCGCAGGGCA CCGCGCGCGT CTCCGGCAGC AACGTGGTGA TCCGGCCCGC CGAGGGCTTC
ACCGGGCAGA TGGTCGTGCG GTACCGGGTC CGCGACGTCA CCGGCGACCC GCTGCGCGAG
GTCGACGGCA CCATCCGCGT CGCCGTCCGC GACGTGCCCG GCGCACCGTC GCCCCCCCGG
GTCGGGGCCG TGACCAGCCG CGCCGTGCCG CTCGCCTGGG ACGCGCCCAC CACCAACGGC
TCGCCCATCA CCGGCTACCG GGTGACCCGG TCGCCCGGTG GCCAGACGAC GTCCTGCCCC
ACCACCACCT GCACCGTGAC CGGCCTGAAC AACGGGACGG AGTACACCTT CACCGTCGCG
GCCGAGAACG CCCTCGGCTG GGGCCCCGAG TCGACCGCGA GCGTCCGGGC CACCCCGGAC
GCCGTCCCCG GCATCCCTGG CGCCCCGAGC CTCGAGGCCG GCGACCGCAC GGTCACCGCC
ACCTGGAGCG CCCCCGCGAA CGACGGGACG CCCGTCACCA AGTACACGGC CGAGCTCTCC
GGACCCGGCG GCATCGTGTC CCGCGAGATC GCCGGGACCA CCATCGTGTT CTCCGGCCTC
GAGAACGGCT CCGGCTACAC CGTCCGCGTC CGCGCCCACA ACGCCGCCAC CCCGCCCGAG
GGCGGGGCCT GGAGCGACGG GTCGCGCGCC GCCGTGCCCG CCGGCCTGCC AGGGACCCCC
GAGGTCAGCG CGGCACGGGT GGACACGGTG CTCGGCGGGC AGATCCGCGC CGCCTGGACC
GCCGCCGGCT CGAACGGCGC CGAGGTCACC GGGTACAGCG TGGTCGCGCA GAGCCCGGGG
CACCCGACGC TCACCGCGTC GGTCGGCGGC GGAGACCGCG AGACGCTGTT CACCTCCGTG
GTCAACGGCG CGGAGTACAC GGTGTCCGTC ACCGCCCGGA ACTCGGTGGG CGAGGGGGCG
CCGGGCGTCA GCGCGCCGAC CTCGACCTTC GCGCCGCCCA AGGCGCCGAC CGGGGCGCGC
GCTGCGGCTG CCTCGGGCCG GCCCTTCGGC GACGGCCAGG TCACGCTCTC GTGGAACGCC
CCGACCGACA CCGGTGGAGT GGGCATCCGC GTCGCGCGCT ACGAGCTCGA GGGCCCTGGC
GGCATAGAGA GCCTCGTCGA GACCAGCAAG ACCGTCTCGC CGATCGCCGG CGGGACGCAG
TCCGCCCAGT TCCGGGTCCG CGCGATCAAC GACCGTGAGG CCGTGGGCGA GTGGACGACG
ATCGCGCCGG TCGACGTGCG GACCGTGCCG CAGAAGCCGG TCGTCACGAT CACCCCCAAC
GGGTTCCGCA GCGTCAACGC GTCGTGGGTC GTCGAGAACA ACGGTGGGTC GTCGGTGACC
GGGTACAAGG TCTGGGTGAA CGGCGCGGAG TCCTCGACGG CTGGGACCTC GATGTCGATC
GACGTGCCGC TCGACGGTCT CGTCACGGTC CAGGTCGTCG CCGTCAACGC CCAGGGCGAC
AGCCTGCCGG AGAGCAAGCA GGGCGGCCCC GCGGCATCGC AGCCGCCGAC CGCCCCGGCC
GCGGTGACCG CGACGCCGAT GGACGCGCCA CCGTCGATCA CGATGAACTG GAGCCCGGCG
AGCGAGAACG GAAGCCCGAT CACTGGGTAT GAGTACCGAC TGACGCGCCC GAACGGCACC
GTCTCACGCT GGTACCAGGC TTCCGGTGGC CCCTCGGCCA CGACCGCGAC GGCCACTGCG
GCGGAGCAGG GTGTCGGACC GGGGATCTGG CGCGTCGAGG TGTCCGCGGT CAGCCCGAAG
GGTCGGACGA CGGCCCCGCC GATCGAGGTG ACGATCGCTG AGCCACCCAC GCCTGAGCCC
GAGCCCACCG ACCCGGGCAC GGACCCCGGC ACGGGGTGA
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| Protein sequence | MRLGRGATRA ERARSTSAVV AGVTVPAVLA IMAVIDPGVK IAEVDLNDGA VWVTNRSELK
LGRYDATVKE LNGGLVATDP SFDVLQSGQD VLLSEPRMLS TVDPATMALS AQAEVPAGST
VAMGAGVVAI TSPEGSVWIR TMTSLASVTS DTPGDLDLGD GALATVDPDG LVLALDPTDG
TVHRGEMVDG TLEITDAGTL DDAAGVLPDA VTAVDGRLVM LAGTTLHGDG WTTEVVDGAA
PVLQQSSSQG PALAVATTSH LLEVDLGSGE VEATPSTGRG TPAAPVRVGE CVYGAWASPT
GSYLVRCGDG DPTVLDLERM TAQSTPVFRV NRAVVALNDT LQGNMWLPDE MPRVQVPNWD
QIEQDDDTTD TEEESDEVES TQQQLTECTA QSAAPGAVDD DLAVRPGRST VLEVLNNDTA
GECGIIAISE LDTSGLDEGF AVVEPVFGGR ALQAVVSPQA QGSAQLTYTI SDGRGNSPPS
TATVTLTAAD PGSNSAPLEL RTGSVELEQG ATVDHDVLAG WVDPDGDELV LLGAVTDGTA
TVRARQNGML TVTAEGEALG RQTVTVVVSD GIEQTTGQVT VDVRATGSLA PRIDPIHVVT
EAGKDVEVDV LESVHSLSRE PVRLASVDEP PGTTVEATLD DGTFTFTATN AATYYVPFSV
VASPQQAQGL VRVDVVEPTT EPQRPVAVRD LAPLPRGGEV IVDPLANDVD PAGGVLVVTS
VAAVDGSALQ AVVVDHRYVR ISSQRDLAAP ETLEYRVSNG LEEVSGEILV QPVEPTGEDR
PPVLQDLEAS VRTTGVVTIP VLDSAVDPDG DVMSVVPDLL EDLSPEQGLL FASGDVLRFQ
ATGTPGIVET TYSVQDTGGN VTTARLTISV HASDPETKTA PRPRALTART FDGETVRIPV
PLTGIDDDGD GVTLLGQGDS VPTLGRIVAV GADYLEYEAF PGSSGTDSFQ YAVEDWTGQR
AQATVRVGIS ARSAQGQAIV ARNDEATVRP GQRVEVRVLR NDVDPSGGEL TLAPELEVPE
GIEAHVDKRR VVVTAPDQAT EPLSIVYTVT NELGATARAT LTVYVVDDAP IAPPIARDVT
VAPIEVVDKT SVEVDVLALA ENPSGPLSDL EVRVPSSHSD VAQVVAGDRV LVTLTDRTQN
IPYRLVNTRP EADGAGAYAF ITVPALGDFP PTLRPKTREL RVASGEELEI SLAEFVQVGT
GKTARVRDAE RVSATNSDQS DLVVDDTTLR FVSAPGYAGP ASITVEVTDG ATRDDQGARR
STLTLPITVF TEDARPPTFT PSELLVPQGE STSVDLLGFT RGPQGASAEQ KYTYEVVQAP
GNGFLASITP GTTRLAVSVP ADVARGTLGS ATVRLGYGTE GTMDVQVTFK VAASSRQLAS
LMVHEAEGAA GRDTTINALA GAGNPFSEPL TLLSASPVVA AQGTARVSGS NVVIRPAEGF
TGQMVVRYRV RDVTGDPLRE VDGTIRVAVR DVPGAPSPPR VGAVTSRAVP LAWDAPTTNG
SPITGYRVTR SPGGQTTSCP TTTCTVTGLN NGTEYTFTVA AENALGWGPE STASVRATPD
AVPGIPGAPS LEAGDRTVTA TWSAPANDGT PVTKYTAELS GPGGIVSREI AGTTIVFSGL
ENGSGYTVRV RAHNAATPPE GGAWSDGSRA AVPAGLPGTP EVSAARVDTV LGGQIRAAWT
AAGSNGAEVT GYSVVAQSPG HPTLTASVGG GDRETLFTSV VNGAEYTVSV TARNSVGEGA
PGVSAPTSTF APPKAPTGAR AAAASGRPFG DGQVTLSWNA PTDTGGVGIR VARYELEGPG
GIESLVETSK TVSPIAGGTQ SAQFRVRAIN DREAVGEWTT IAPVDVRTVP QKPVVTITPN
GFRSVNASWV VENNGGSSVT GYKVWVNGAE SSTAGTSMSI DVPLDGLVTV QVVAVNAQGD
SLPESKQGGP AASQPPTAPA AVTATPMDAP PSITMNWSPA SENGSPITGY EYRLTRPNGT
VSRWYQASGG PSATTATATA AEQGVGPGIW RVEVSAVSPK GRTTAPPIEV TIAEPPTPEP
EPTDPGTDPG TG
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