Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_05430 |
Symbol | |
ID | 8632180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 604881 |
End bp | 605846 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | carbohydrate ABC transporter membrane protein |
Protein accession | YP_003313337 |
Protein GI | 269793882 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0550121 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACCG TGTCCCTCAC TGCCGAGGCG ACCGGGAACC GGACTGCTCC ACCGACCAAG GGCTCGCAGG CGCGACGCTC TCGGAAAGCA GCCGAGACCC GCGCCGGTTA CGCGTTCCTC ACCCCCTGGC TGCTGGGATT CCTCCTGCTG ACCGCGGGAC CGATGATCGC GTCCCTGTAC CTGGCCTTCA CGAACTACAA CCTGTTCAGC GCACCTGAGT GGATCGGGTT CGACAACTTC ACGCGGATGT TCTCCGACCC GCAGTACATC CAGTCGGTCA AGGTGACCGG TCTGTACGTG CTCATCGGGA CCCCGATCAA GCTGATCGCC GCACTCGCCG TCGCGATGCT GCTCAACAGC AAGCGTCGCG GCCAGGGTGC CTACCGGTCG ATCTTCTACG CGCCCTCGCT CATCGGCGCG AGCGTCTCGA TCGCCATCGT GTGGAAGGCC ATGTTCATCG ACGACGGTGT CGTCGACCAG ATCGGCCAGG TCTTCGGGCG TGACGCTGGT GGCTGGGTCG GCAACCCGAG CATGACCATG CCGATGATGA TCCTGCTGAC CGTGTGGCAG TTCGGTGCCC CGATGGTCAT CTTCCTCGCG GGCCTCAAGC AGGTCCCCAA CGAGCTCTAC GAGGCTGCCG AGATGGACGG AGCCGGCCCG GTCCGCAAGT TCCTGCGGAT CACGCTGCCG ATGCTCTCCC CGGTGCTCTT CTTCAACCTG CTGCTCGAGA CCATCCACTC GTTCCAGATC TTCGGCTCCG CCTTCATCAT CTCGGGCGGC ACCGGTGGTC CCGCCGGGTC GACGCTCTTC TACACCCTGT ACCTCTACCG TCGCGGTTTC GTGGACTTCC AGATGGGCTA CGCCGCGGCG ATGGCCTGGG TCCTCGTGCT CGCCGTCGGC ATCATCACCT TCATCTTCTT CAAGACGTCG AAGTCGTGGG TCCACTACTC AGGGGAGACA AAATGA
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Protein sequence | MTTVSLTAEA TGNRTAPPTK GSQARRSRKA AETRAGYAFL TPWLLGFLLL TAGPMIASLY LAFTNYNLFS APEWIGFDNF TRMFSDPQYI QSVKVTGLYV LIGTPIKLIA ALAVAMLLNS KRRGQGAYRS IFYAPSLIGA SVSIAIVWKA MFIDDGVVDQ IGQVFGRDAG GWVGNPSMTM PMMILLTVWQ FGAPMVIFLA GLKQVPNELY EAAEMDGAGP VRKFLRITLP MLSPVLFFNL LLETIHSFQI FGSAFIISGG TGGPAGSTLF YTLYLYRRGF VDFQMGYAAA MAWVLVLAVG IITFIFFKTS KSWVHYSGET K
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