Gene Sked_05270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_05270 
Symbol 
ID8632164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp581414 
End bp582991 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content71% 
IMG OID 
Productaltronate dehydratase 
Protein accessionYP_003313321 
Protein GI269793866 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACCA CCCCCCACGC CGGCCTCGCG GCCGAGCAGC TCGACCTCGC CGACGTCCTC 
CTCGTGCTGC GCGAGGGCGA CGACGTCGCG GTGACCACCC GTGACCTGCG ACCGGGCACC
GTGCTGCGGA GCAGCGGTGC GGGTGCGGTG GGCCTCGAGG TGCTCGACAG CGTCCCGCGC
GGCCACAAGA TCGCCCTCGT CGACATCCCG GAGGGTGCGC AGGTCCGCAA GTACGGCCAG
TCGATCGGCG TCGCGACCCG GCCGGTCTCG GCGGGCCAGC ACGTGCACGC CCACAACCTC
GGCATGGACC TGGCGGAGCG CGAGCACGAG TTCGCGACCG TGCACCACGA GCTCCCCGAG
CCGTCCGGGC CGCGTCCCAC CTTCGAGGGC TACCGGCGTG CCGGCGGGCG GGTCGGTACC
CGGAACTACA TCGGCATCCT CACCTCCGTG AACTGCTCGG CGAGCACCGC GAAGATGATC
GCCGACCAGT TCCGCGGCCC GGTGCTCGAC GAGCACGAGC ACGTCGACGG CGTCATGGCC
CTCACGCACG ACTCGGGCTG CGGCCTGGTG CCGGTGAGCG AGGGCGCGCA GATGCTCGTG
CGCACCCTCA AGGGTTATGC GGAGCACCCG AACTTCGCCG GGATCCTCGT GGTCGGGCTC
GGCTGCGAGA TGATCGCGGT CGGCTCGCTC CTCGACGGCC TCGACCTCTC GCCCGACACC
GTGGTCCAGC ACCTCACCAT CCAGGAGTCC GGCGGCATCC GCGCCACCGT GCGCCAGGGC
GTGGCAGCGG TCCGCGCGAT GCTCCCGGAC GTCGACTCCC GTCGCCGCGA GACCTGCGAC
GTCTCCGAGC TGGTGGTCGG GCTCAACTGC GGTGGTTCCG ACGGGTACTC GGGCATCACC
GCGAACCCGG CGCTCGGCGT CGCCTCCGAC CTGCTCGTCT CCTACGGCGC GACCACCGTG
CTGGCCGAGA CCCCCGAGGT GTTCGGCGCA GAGCACCTGC TCACGCGTCG TGCCGTCAGC
GAGGAGGTGG GCCGCCGGCT GCTGGACCGC ATCGACTGGT GGCAGGACTA CGCCGCGGCT
GGCGGAGGGT CTCTCGACAA CAACCCGTCG CCCGGCAACA AGGCCGGCGG GCTCACCACC
ATCCTCGAGA AGTCTCTCGG TGCGGTCGCC AAGGGCGGCC AGGCCGACCT CGTCGAGGTG
TACCGGTACG CCGACCGCAT CACCGCCAAG GGCTTCTGCT TCATGGACAC CCCGGGCTAC
GACCCGGTGT CGGTGACGGG GCTCATCGCG GGCGGCTCGA CGGTGGTCTG CTTCACGACG
GGGCGCGGCT CGGTGCTCGG CGCCAAGCCC ACGCCGTCGC TCAAGCTCGC GACCAACAGC
GAGCTCTACG CGCGGCAGGC CGAGGACATC GACATCAACT GCGGTCGCAT CGTCGACGGC
ACCGCGACGC TCGAGGAGGT CGGTCGGGAG ATCTTCGGCG AGATCCTCGC CGTCGCGTCG
GGCAAGGAAA CGGTCTCGGA GGACCTCGAC CTCGGCCAGG ACGAGTTCAT CCCGTGGCAG
CTCGGGACGG TCACCTGA
 
Protein sequence
MTTTPHAGLA AEQLDLADVL LVLREGDDVA VTTRDLRPGT VLRSSGAGAV GLEVLDSVPR 
GHKIALVDIP EGAQVRKYGQ SIGVATRPVS AGQHVHAHNL GMDLAEREHE FATVHHELPE
PSGPRPTFEG YRRAGGRVGT RNYIGILTSV NCSASTAKMI ADQFRGPVLD EHEHVDGVMA
LTHDSGCGLV PVSEGAQMLV RTLKGYAEHP NFAGILVVGL GCEMIAVGSL LDGLDLSPDT
VVQHLTIQES GGIRATVRQG VAAVRAMLPD VDSRRRETCD VSELVVGLNC GGSDGYSGIT
ANPALGVASD LLVSYGATTV LAETPEVFGA EHLLTRRAVS EEVGRRLLDR IDWWQDYAAA
GGGSLDNNPS PGNKAGGLTT ILEKSLGAVA KGGQADLVEV YRYADRITAK GFCFMDTPGY
DPVSVTGLIA GGSTVVCFTT GRGSVLGAKP TPSLKLATNS ELYARQAEDI DINCGRIVDG
TATLEEVGRE IFGEILAVAS GKETVSEDLD LGQDEFIPWQ LGTVT