Gene Sked_05100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_05100 
Symbol 
ID8632147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp564165 
End bp564944 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003313305 
Protein GI269793850 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGA ACCGTGACCT GACCCGGCAG ATATCCGTCC TCGTGCTCGC GGTGGTCGCG 
ATCTTCGGTG CCGCGTGGGG CGCCGGAGCC TTCGGCGGGA CGCCGACCTC TGAGGCGGCC
GACGGGGCGC TGTCCGCCAG CGCCACCCCG GTTGCCCCGG GCACCACGGC CTTCTCCATC
TGGTCCGTCA TCTACGTCGG GCTCATCGCC TACGCCGTCT GGCAGGCGCT CCCGTCGCAG
CGCGAGTCCG CCCGTCAACG CTCGATGGGA TGGCTCGCCG CGCTCTCCAT GCTGCTCAAC
GCCGGGTGGC TGCTCGTGGT CCAGGCCGGG TCGGTGTGGG CGAGCGTCGT GGTCATGGCC
GCGCTGCTCA CCACTCTCGT CATGATCCTC GAGCGGATGC GCGCCACCCC GTCGTCCTCG
CTCGTCGAGA CCGTGCTGGT CGACGGGACC TTCGGGCTCT ACCTCGGCTG GGTGACGGTC
GCGGCCATCG CGAACGTCGC CGCCGCGATC ACCACCGCCG AGCCGGGCGA CCTCGGCCTC
GGGTCAACCG GCTGGGGCGT CGTCCTCGTG GTGGTCGCCG CGCTCGTCGC CGTCGCCTAC
GCCGTGCACA CGCGCGGCCG CATCGCCATC AACCTCGCCA TGGCGTGGGG GCTCGCATGG
ATCGCCGTCG CGCGCTGGGA GGGTCCGCTC GAGGACTCGA CCGTCGCGCC CGTCGCAGCA
GGTGCAGCCG CGGTCGCGCT GCTCTCCGCC GTCGTCGTCC GGCTCCGCCG CCGGGCCTGA
 
Protein sequence
MTTNRDLTRQ ISVLVLAVVA IFGAAWGAGA FGGTPTSEAA DGALSASATP VAPGTTAFSI 
WSVIYVGLIA YAVWQALPSQ RESARQRSMG WLAALSMLLN AGWLLVVQAG SVWASVVVMA
ALLTTLVMIL ERMRATPSSS LVETVLVDGT FGLYLGWVTV AAIANVAAAI TTAEPGDLGL
GSTGWGVVLV VVAALVAVAY AVHTRGRIAI NLAMAWGLAW IAVARWEGPL EDSTVAPVAA
GAAAVALLSA VVVRLRRRA