Gene Sked_04790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_04790 
Symbol 
ID8632116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp534550 
End bp535635 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content73% 
IMG OID 
Product3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 
Protein accessionYP_003313275 
Protein GI269793820 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.321532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.247081 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCCC ACTCGTCACT GGACACTCTC ATCGACGCTC ACAGCACCAA CGACCTGCGC 
ATCCGCGCCC TCGACCCGCT GCCCGCCCCG GCGACCATGC TCGCCGAGCT GCCGTTGTCC
GACCGCAGCG CGGAGCTCGT CGAGCGCAGC CGCGGCGAGG TCCGCGACGT CGTCCACGGC
ACGGACGACC GCCTCCTCGT GATCGTCGGG CCGTGCTCGG TCCACGACCC CGCCGCCGCA
CTCGACTACG CCCGTCGCCT CGCGCCCCTC GCGCAGGAGC TCGCCGACGA CCTCGTCGTC
GTCATGCGTG TGTACTTCGA GAAGCCGCGC ACCACCGTCG GGTGGAAGGG CCTCATCAAC
GACCCCGGCA TGGACGAGTC CTTCGACGTC AACCGCGGCC TGCGCCTGGC GCGCGAGGTC
CTGCTCGGCG TGCTCGACGA GGGCGTCCCG GCGGCCTGCG AGTTCCTCGA GCCGACGAGC
CCGCAGTACA TCGCCGACGC CGTCTCGTGG GGCGCGATCG GCGCCCGCAA CCCCGAGAGC
CAGGTGCACC GCCAGCTCGC CTCCGGCCTC TCGATGCCCA TCGGCTTCAA GAACGCCACG
GACGGCGACG TCCAGGCCGC TGTCGACGGC TGCGTCACCG CAGCCGCCGA GCACACGTTC
TTCGGCATCG ACGCCGACGG CCGCGCGGCA GCCGTCGCGA CGACCGGCAA CCCGGACTGC
CACGTGATCC TGCGCGGCGG CCGCTCGGGC CCCAACTTCG ACGACGCCTC CGTCGCCGAC
GCGCTCGACG TGGTCGGTGC CGCGGACCTC GGCCGCCGCC TGGTCATCGA CGCGAGCCAC
GGCAACTCCG GCAAGTCCCA CGTCCGCCAG GCCGAGGTGG TCCGCGAGAT CGCAGGCTCC
GTCGCTGCCG GCAACCACGG CATCTCCGGG ATCATGATGG AGAGCTTCCT CGTGGCCGGC
GCGCAGAAGC CCGCACCGAG CGGCCTCGTC TACGGCCAGT CCGTCACGGA CGCCTGCATC
GACTGGGACA CCACCGCCGA GCTCCTCACC GAGCTCGCCG CAGCCTCCCG CGCCCGCCGG
GCCTGA
 
Protein sequence
MSAHSSLDTL IDAHSTNDLR IRALDPLPAP ATMLAELPLS DRSAELVERS RGEVRDVVHG 
TDDRLLVIVG PCSVHDPAAA LDYARRLAPL AQELADDLVV VMRVYFEKPR TTVGWKGLIN
DPGMDESFDV NRGLRLAREV LLGVLDEGVP AACEFLEPTS PQYIADAVSW GAIGARNPES
QVHRQLASGL SMPIGFKNAT DGDVQAAVDG CVTAAAEHTF FGIDADGRAA AVATTGNPDC
HVILRGGRSG PNFDDASVAD ALDVVGAADL GRRLVIDASH GNSGKSHVRQ AEVVREIAGS
VAAGNHGISG IMMESFLVAG AQKPAPSGLV YGQSVTDACI DWDTTAELLT ELAAASRARR
A