| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_03920 |
|---|
| Symbol | |
|---|
| ID | 8632030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 436438 |
|---|
| End bp | 437751 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | carbohydrate-binding protein |
|---|
| Protein accession | YP_003313193 |
|---|
| Protein GI | 269793738 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTGG CCCGCACCCG ACTCACCGCA GCTGCGGTGA CGATCGCAGC ACTCACCCTC
GGCGTCTCCG CCTGCGGGGG CGACTCCGAG GGCTCGTCCG CCGACGGCCC CGTGAACCTC
ACGTTCTGGA CGTGGGCTCC CGAGATGGAG GCCGTCGTCG ACATCTGGAA CGAGGCCAAC
CCCGACATCC AGGTCACGGT CAACAAGCAG GACGGCGGCG ACGCCGCGGT CACCAAGCTC
CTCACGGCCA TCAAGGCCGG CAGCGGAGCG CCCGACATCA TGCAGGCCGA GTACCAGGCC
ATCCCGACCA TGGTGTCCTC CGACGCCCTC GCCGACGTCT CGGCCGAGGT CGGCGACGAC
CTCCCCGGCC ACTTCGCCGA CGGCGTCTGG AACTCCGTGA CCCTCGGCAC CGACGCGGTC
TACGGCATCC CGCAGGACTC CGGGCCCATG CAGTTCTACT ACCGCGCGGA CATCTTCGAG
GAGATGGGCC TCGAGGTCCC GACCACGTGG GACGAGTACG CGGACGTCGC CGAGCAGCTC
CACACGGCCG ACCCCTCCAA GTTCCTCGGG ACGTTCTCGG CGACCGACGC CGGGTCCTTC
ACCGGTCTCG CCCAGCAGGC CGGCGCCTCG TGGTGGGGCA TCGAGGGCGA CTCGTGGACC
GTCGACATCG ACGACGAGGC CACCCTCAAG GTCGCGCAGT ACTGGGGCGA CCTCGTCGAG
GCGGGCACCA TCGACAACAA GCCGATGTAC ACCCCCGAGT GGAACGCAGC CCTCAACAAC
GGCTCGCAGG TCGGCTGGCT CAGCGCCGTC TGGGCACCCG GCGTCCTCGC CGGCAACGCC
CCCGACACCG AGGGCCTCTG GAAGATGGCT CCGATGCCGC AGTGGGACGC CTCGGCGCCC
GCGACCGGCA ACTGGGGCGG CTCGGCCACC GCGGTCACCA CGCAGTCCGA CCACGCCGCG
CAGGCCGTCG AGTTCATCAC CTGGATGAAC ACCTCGGAGG AGGGCGTCGC CGCCCTCGCC
GACGTGTCCG GCATCTACCC GGCCGACATC CCGGGCCAGA GCACCGCGCT CACCGACCCG
CCCGCGTTCT TCGCGAACCA GCCCGACTTC TACGACATCG TCGCGGAGAC CGCCGGCACG
GCCAACCCCT TCACCTACGG CCCGAACGTC AACGTCGCCT ACTCGGCCTT CAACGACGCC
TTCGGCAAGG CCGCCGAGTC CCGCTCCGCG GCCGGGTTCG TGGAGGGCAT CGAGTCGATG
CAGACCACCA CGGTCGAGGA CCTCAAGAAC TCCGGGTTCT CGGTCGCCGA GTAG
|
|---|
| Protein sequence | MRLARTRLTA AAVTIAALTL GVSACGGDSE GSSADGPVNL TFWTWAPEME AVVDIWNEAN
PDIQVTVNKQ DGGDAAVTKL LTAIKAGSGA PDIMQAEYQA IPTMVSSDAL ADVSAEVGDD
LPGHFADGVW NSVTLGTDAV YGIPQDSGPM QFYYRADIFE EMGLEVPTTW DEYADVAEQL
HTADPSKFLG TFSATDAGSF TGLAQQAGAS WWGIEGDSWT VDIDDEATLK VAQYWGDLVE
AGTIDNKPMY TPEWNAALNN GSQVGWLSAV WAPGVLAGNA PDTEGLWKMA PMPQWDASAP
ATGNWGGSAT AVTTQSDHAA QAVEFITWMN TSEEGVAALA DVSGIYPADI PGQSTALTDP
PAFFANQPDF YDIVAETAGT ANPFTYGPNV NVAYSAFNDA FGKAAESRSA AGFVEGIESM
QTTTVEDLKN SGFSVAE
|
|---|
| |