Gene Sked_03830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_03830 
Symbol 
ID8632021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp427546 
End bp428589 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content74% 
IMG OID 
ProductABC-type multidrug transport system, ATPase component 
Protein accessionYP_003313184 
Protein GI269793729 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.112396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.109015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGC ACACCACCTC CAGCCCGGCG CAGAACGGTG ACCTCGTCAT CGACGTGCGC 
GACGCCCGGC GCCGCTACGG TGCCCCGACC TCCCGGCGCA AGGGCGCCTC GCGCGGCTTC
GACGCCGTCC GCGGCGTCGA CCTCCAGGTG CGCCGCGGGG AGCTCTTCGC CCTCCTCGGC
ACCAACGGCG CCGGCAAGAC CTCGCTCATG GAGATGATCG AGGGCATCGC CGCACCGACC
GGCGGCTCGA TCCGCGTCCT CGGCAAGGAC CCGTTCCTGG ACCGGTCCGC CGTGCGCCCG
CACACCGGCA TCATGCTCCA GGACGCCGGG TTCCCCGCCG ACCTCACCGT CAAGGACATG
GCCAAGGCCT GGGCCGGCAC CCTCACCGAC CCGCGTCCCG TGGGGGAGGC CCTCGACCTC
GTGGACCTCG GCCGCCGCGA GAGCGTCGCC ATCCAGAGCC TGTCCGGCGG CGAGCGCCGC
CGCCTCGACC TCGCGCTCGC CATCATGGGC CGCCCGTCCG TCCTGTTCCT CGACGAGCCG
ACCACCGGCC TCGACCCCGA GAGCCGCATC GCGGCCTGGG AGCTCATCGC CACGCTGCGC
GACGCCGGCA CCACGATCAT GCTCACCACG CACTACCTCG ACGAGGCGGC CCGCCTCGCC
GACCGGCTCG CGATCATGCA CCACGGGCAG GTGGTCGTCA CCGGCACCCA GTCCGAGATC
GTCTCCGGCT ACCCCTCGCG CATCGGCGCG ACTCTCCCGG CCGACGCACC GCCCCTGCCG
CCCGAGATCG TCCGCGGCCT CCGCGGCGAC GGACCCCGCG CGCTCGTCGA GACCGACGAC
CTCCAGGGCG ACCTCACCCG CCTGCTCGCC TGGGCCCAGC AGCACCAGGT GACCCTCGGC
GACCTCGACG CCCGCGCGTC GACCCTCGAG CAGGCCTTCC TGTCGATCGC CGCCCAGCCG
CGCGTCGACG ACCAGACCTC CGCCGCCTCG ACAGGCATGG CGCCCACCAC CCTGCACGCC
GCACCGAAGG AGCACGCAGC ATGA
 
Protein sequence
MSQHTTSSPA QNGDLVIDVR DARRRYGAPT SRRKGASRGF DAVRGVDLQV RRGELFALLG 
TNGAGKTSLM EMIEGIAAPT GGSIRVLGKD PFLDRSAVRP HTGIMLQDAG FPADLTVKDM
AKAWAGTLTD PRPVGEALDL VDLGRRESVA IQSLSGGERR RLDLALAIMG RPSVLFLDEP
TTGLDPESRI AAWELIATLR DAGTTIMLTT HYLDEAARLA DRLAIMHHGQ VVVTGTQSEI
VSGYPSRIGA TLPADAPPLP PEIVRGLRGD GPRALVETDD LQGDLTRLLA WAQQHQVTLG
DLDARASTLE QAFLSIAAQP RVDDQTSAAS TGMAPTTLHA APKEHAA