Gene Sked_02850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_02850 
Symbol 
ID8631923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp309571 
End bp310479 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content61% 
IMG OID 
Productcarbohydrate ABC transporter membrane protein 
Protein accessionYP_003313088 
Protein GI269793633 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC TCACACGCCT GAGGAGCCGC ACGCCCGGCG ACATCGCCTT CACGGTGCTC 
GTCTCGGTGT CCCTCGTGGT CATCGTCTTC GTGACGCTGT ACCCGATCTA CTTCGTCATG
ATCGCCTCGA TCAGCGCACC CGCGCTGGTG CAGTCGGGCG ACGTGTCGTT CATCCCCAAG
GGCATCAACT GGTTCGGGTA CGAGCAGATC CTCAATGACT CCCGCATCTG GAACGGCTAC
AAGAACACGC TCATCTACAC GGTGCTCGGC ACGGCCGTGA ACATGCTCGT GACGATCCCG
GCGGCGTACG CGCTGTCGCG TCGCGACTTC GCGGCCCGTC GTCCGCTCAT GCTGTTCTTC
GCCTTCACGA TGTTCTTCAA CGGCGGTCTG ATCCCCACGT ACATGCTGTA CAAGGAGATC
GGCCTGCTGA ACAACATGTG GGTGTTCATC CTGCCGTCGG CCCTCAACGT CTACAACCTC
ATCATCGCGA GGGCGTTCTA CGAGCACTCG CTGCCCGAGG AGCTCTACGA GGCGGCGACG
CTGGACGGGG CCAACCACTT CCAGTTCTTC TTCAAGATGG CGATCCCGCT GTCGAAGGCG
ATCCTGTCGG TGATCATGCT CTACTACATC GTCCAGCACT GGAACGACTT CTTCACCGGT
CTCATCTTCA TCCGGGACTA CGACAAGCAG CCGCTGCAGA TCGTGCTGCG CGACATCCTC
ATCTCGAACA CGGCGTTCGC CGGCGGAGCA GGTGGTGCCG GTGGCACGGG TGGCGGGTAC
GGGCAGCAGT TCGCGGACCA GATCAAGTAC GGCGTCATCG TGGTGTCCAC GCTGCCGGTG
ATCATCCTCT ACCCCTTCTT GCAGAAGTAC TTCGAGAAGG GCGTCATGAT CGGGTCGGTG
AAGGGATGA
 
Protein sequence
MSTLTRLRSR TPGDIAFTVL VSVSLVVIVF VTLYPIYFVM IASISAPALV QSGDVSFIPK 
GINWFGYEQI LNDSRIWNGY KNTLIYTVLG TAVNMLVTIP AAYALSRRDF AARRPLMLFF
AFTMFFNGGL IPTYMLYKEI GLLNNMWVFI LPSALNVYNL IIARAFYEHS LPEELYEAAT
LDGANHFQFF FKMAIPLSKA ILSVIMLYYI VQHWNDFFTG LIFIRDYDKQ PLQIVLRDIL
ISNTAFAGGA GGAGGTGGGY GQQFADQIKY GVIVVSTLPV IILYPFLQKY FEKGVMIGSV
KG