Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_02850 |
Symbol | |
ID | 8631923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 309571 |
End bp | 310479 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | carbohydrate ABC transporter membrane protein |
Protein accession | YP_003313088 |
Protein GI | 269793633 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACGC TCACACGCCT GAGGAGCCGC ACGCCCGGCG ACATCGCCTT CACGGTGCTC GTCTCGGTGT CCCTCGTGGT CATCGTCTTC GTGACGCTGT ACCCGATCTA CTTCGTCATG ATCGCCTCGA TCAGCGCACC CGCGCTGGTG CAGTCGGGCG ACGTGTCGTT CATCCCCAAG GGCATCAACT GGTTCGGGTA CGAGCAGATC CTCAATGACT CCCGCATCTG GAACGGCTAC AAGAACACGC TCATCTACAC GGTGCTCGGC ACGGCCGTGA ACATGCTCGT GACGATCCCG GCGGCGTACG CGCTGTCGCG TCGCGACTTC GCGGCCCGTC GTCCGCTCAT GCTGTTCTTC GCCTTCACGA TGTTCTTCAA CGGCGGTCTG ATCCCCACGT ACATGCTGTA CAAGGAGATC GGCCTGCTGA ACAACATGTG GGTGTTCATC CTGCCGTCGG CCCTCAACGT CTACAACCTC ATCATCGCGA GGGCGTTCTA CGAGCACTCG CTGCCCGAGG AGCTCTACGA GGCGGCGACG CTGGACGGGG CCAACCACTT CCAGTTCTTC TTCAAGATGG CGATCCCGCT GTCGAAGGCG ATCCTGTCGG TGATCATGCT CTACTACATC GTCCAGCACT GGAACGACTT CTTCACCGGT CTCATCTTCA TCCGGGACTA CGACAAGCAG CCGCTGCAGA TCGTGCTGCG CGACATCCTC ATCTCGAACA CGGCGTTCGC CGGCGGAGCA GGTGGTGCCG GTGGCACGGG TGGCGGGTAC GGGCAGCAGT TCGCGGACCA GATCAAGTAC GGCGTCATCG TGGTGTCCAC GCTGCCGGTG ATCATCCTCT ACCCCTTCTT GCAGAAGTAC TTCGAGAAGG GCGTCATGAT CGGGTCGGTG AAGGGATGA
|
Protein sequence | MSTLTRLRSR TPGDIAFTVL VSVSLVVIVF VTLYPIYFVM IASISAPALV QSGDVSFIPK GINWFGYEQI LNDSRIWNGY KNTLIYTVLG TAVNMLVTIP AAYALSRRDF AARRPLMLFF AFTMFFNGGL IPTYMLYKEI GLLNNMWVFI LPSALNVYNL IIARAFYEHS LPEELYEAAT LDGANHFQFF FKMAIPLSKA ILSVIMLYYI VQHWNDFFTG LIFIRDYDKQ PLQIVLRDIL ISNTAFAGGA GGAGGTGGGY GQQFADQIKY GVIVVSTLPV IILYPFLQKY FEKGVMIGSV KG
|
| |