Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_02770 |
Symbol | |
ID | 8631915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 299677 |
End bp | 300210 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | RNA polymerase sigma factor, sigma-70 family |
Protein accession | YP_003313080 |
Protein GI | 269793625 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAACT CTGTGAGCAT GAAGCACCAG CACACGGTGG ACCTCAAGAC CACGAAGGTC TTCACGGCAC TCTTCGAAGA CCACTACGAC CGCGTCGTCA GGTTCGTGGT GCGTCGCGTC GACAACGAGG CGGACGCCAC CGAGCTCGCC GCCGAGACGT TCCGCCGCGC CTGGGAGCTC AGCCGCCGCG AAGGCCGCGT CCCGTCACCA GCATGGTTGT TCGCGACCGC GCGACACACG GTCGGAGATC TCTACAGGTC TCGTGAGCGA GCATCGAGGC TCGAGGCGGG GCTCTGCGAC CGAACCTCCC TACCACCGAC CGACGACGCA GCAGACGACG TCCTGCAGGC GCTGTCAGCA CTGTCGACGA CCGACCGAGA GTTGCTCCAG CTCCGGTACT GGGACGACCT GACCGTCTCC GAGATCTCCC ACCTCCTGGA GGTCTCGGCG TCCACGCTCT GGGTACGCCT CCACCGCGCA CGACGTCGCT TCGCCGACCA CTACACGCAG ACCGAGCAGA GGACAGCATC ATGA
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Protein sequence | MDNSVSMKHQ HTVDLKTTKV FTALFEDHYD RVVRFVVRRV DNEADATELA AETFRRAWEL SRREGRVPSP AWLFATARHT VGDLYRSRER ASRLEAGLCD RTSLPPTDDA ADDVLQALSA LSTTDRELLQ LRYWDDLTVS EISHLLEVSA STLWVRLHRA RRRFADHYTQ TEQRTAS
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