Gene Sked_01920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_01920 
Symbol 
ID8631830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp202345 
End bp203130 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content70% 
IMG OID 
Producttranscriptional regulator of sugar metabolism 
Protein accessionYP_003312997 
Protein GI269793542 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCGCG AGGAACGTCT GTCCCGGCTC GTCGACCACA TCGTCGCCAA CGGCTCGGTC 
CACGTGGAGG AGGTCGTCGA GACCTTCCAG GTCTCCCCCG CCACCGCCCG GCGCGACCTC
GACACCCTGG CGGAGCAGCA GCTGGTCAGC CGCACGCGTG GCGGGGCGAC GGTCAACAGC
ATCTCCGGCG ACCTGCCCAT GCGGTACCGC ACGGTGCGCC GCTCGCAGGA GAAGAACTCC
ATCGGCGCAG CGGTCGCCGC GATGGTCACG CCGGGTGAGG TCATCGCCTT CAACGGTGGG
ACCACCACCA CCGTCGCCGC CTACGAGGTC GGTGTCGCGA CCTCGGGCGA CGAGCGGTTC
TCCGGCTCGG TCACGACCGT GGTGACGAAC GCCGTGAACA TCGCGAACGA CCTCATCGTC
CGCCAGAACC TGCGCATCGT CGTGACGGGC GGCGTCGCCC GCGCACGGTC GTACGAGCTC
GTCGGTCCCC TCGCGTCGCT CATGCTGCCG GAGATCAACA TCGACACGTT GTTCCTCGGG
GTGAGCGCGG TCGACCTGGA GCACGGCCTC TTCACGCACC ACGAGGGCGA GGCGGCCGTG
AACGCGGCCC TCGTGTCGCT CGCACGGCGC ACCTACGTCG TCGCGGACTC GGACAAGTTC
TCGGCGACGG CCTTCGCCCG CATCTGCGGG CTGGACGACG TCCAGGGCGT CATCACCGAC
TCCGGCACCG ACGAGAGCAC CCTCGACGTG CTCCGCGGCC GTGGCCTGGA CGTCGTCGTC
GGCTGA
 
Protein sequence
MEREERLSRL VDHIVANGSV HVEEVVETFQ VSPATARRDL DTLAEQQLVS RTRGGATVNS 
ISGDLPMRYR TVRRSQEKNS IGAAVAAMVT PGEVIAFNGG TTTTVAAYEV GVATSGDERF
SGSVTTVVTN AVNIANDLIV RQNLRIVVTG GVARARSYEL VGPLASLMLP EINIDTLFLG
VSAVDLEHGL FTHHEGEAAV NAALVSLARR TYVVADSDKF SATAFARICG LDDVQGVITD
SGTDESTLDV LRGRGLDVVV G