Gene Sked_01200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_01200 
Symbol 
ID8631758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp124163 
End bp124873 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content71% 
IMG OID 
Productprotein containing C-terminal region of TrgB protein 
Protein accessionYP_003312926 
Protein GI269793471 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC ACCAGCAGGA CACCGCCCTC CTCGGTTCGC AGCCACAGCC CGCAACGTCG 
CGCCTCGGAG TCGACGTCCC CGACTCACGC GGCCGCACCG GCCTCGACCA GGTCGGCCGC
GACCTCGACC GCAACCCCGA CGTCGTGGTC CGCGACGTCG AGGTCACCTC CGACGGCTGG
CACGTCCTGC GGCGCACCAC CTTCGACCAC CGCCGCTCCG ACGGCACCTG GGAGACCCAG
CAGCGCGAGA CCTACGACCG CGGGAACGGC GCGACCATCC TGCTCTACGA CCTCGCCGCC
GGGACCGTCC TGCTCACCCG CCAGCTGCGC TACCCCGCCT ACGTCAACGA CCACCCCGAC
GGCATGCTCG TCGAGACCGC GGCAGGCCTA CTCGACGACG ACGAGCCCGA GGTCGCCATC
CGCCGTGAGG CCGCCGAAGA GCTCGGCGTC GAGGTCGGTG ACCTCACCCA CGTGTTCGAC
CTCTACATGA GCCCGGGGTC CGTCACCGAG CGCCTGCACT TCTACGTCGC ACCGTTCACC
GCGGCCACCC GCACCGGACC CGGCGGCGGC GTCGTCGAGG AGGGCGAGGA CATCGAGGTG
CTCGCCCTGC CCTTCGACCA GGCGCTCACC ATGATCGAGA CCGGCGAGAT CGTCGACGGC
AAGACCGTCA TCCTGCTGCA GTGGGCCCGG CTGAACGTGT TCGGGGTGTG A
 
Protein sequence
MTTHQQDTAL LGSQPQPATS RLGVDVPDSR GRTGLDQVGR DLDRNPDVVV RDVEVTSDGW 
HVLRRTTFDH RRSDGTWETQ QRETYDRGNG ATILLYDLAA GTVLLTRQLR YPAYVNDHPD
GMLVETAAGL LDDDEPEVAI RREAAEELGV EVGDLTHVFD LYMSPGSVTE RLHFYVAPFT
AATRTGPGGG VVEEGEDIEV LALPFDQALT MIETGEIVDG KTVILLQWAR LNVFGV