| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_00200 |
|---|
| Symbol | |
|---|
| ID | 8631659 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 21855 |
|---|
| End bp | 23324 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | cell elongation-specific peptidoglycan D,D-transpeptidase |
|---|
| Protein accession | YP_003312831 |
|---|
| Protein GI | 269793376 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.765368 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.710729 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTCC CCATCCGGCG CGTCGCCGTC GTCGCCCTCG CCCTGTTCCT CATCCTCATG
GGCGCCGCGA CGTGGATCCA GTTCGTCCAG GCTCCCTCGC TCAACGCGGA CGGCCGCAAC
TCGCGGTCGC TGTACCGCGA GCTGAGCATC CAGCGCGGCC CGATCGTCGC CGGTGGCCAG
ACGATCGCCG AGTCCGTGCC CGTCGACGAC GCCTTCAAGT ACCAGCGCGT GTACTCCCAG
CCCGAGATGT ACGCGGCCGT CACCGGCTAC TACTCGTTCC GGTTCCAGTC GACCGGTCTC
GAGCGGTCGG CCAACGAGTA CCTCGCCGGG ACCTCCGACT CGCTCTGGTG GGACAGGTTC
CGCAACCTCG TGAGCGGCGG CTCACCGCAG GGTTCCTCGG TCGAGGTGAC CATCGACCCC
GTGGTGCAGC AGGCCGCGTG GGACGCGCTC GGCAACCAGC GCGGAGCCGT GGTCGCCCTC
GACCCCAAGA CGGGTGCGAT CCTCGCCCTG GTCTCCAAGC CGTCCTACGA CCCCAACCTC
GTCGCCTCGC ACTCCGCCGC CGACGCGAGC GCCGCCTACC AGGCGCTCGC CGACGACAGC
GCACGGCCGC TCGACAACCG CGCGACCGCC GGCCGGACCT ACCCGCCCGG GTCGACCTTC
AAGCTGGTCA CCGCCGCCGC GGCGCTCGAG GACGGGACCG TGACCACCGA GGACCAGATC
CCGGCGCCCG ACCAGCTCCA GCTCCCCCAG TCGAGCAGGA TGCTCAACAA CTTCGGCGGG
GAGTCGTGCT CGCCGACCGG CACCATGACC CTCGCCGACG CCCTGCGCAT CTCGTGCAAC
ACCGCCTTCG CGCAGCTCGG CATGGACCTC GGGCCCGAGG CCCTCGACGA CCAGGCCGAG
GCGTTCGGCT TCGACTCCCG GATGTCGGTC CCGCTCCCGG TCACCCCCAG CCACTTCCCG
CTCGAGGTCG ACGGCCAGAC CATCGACGAC GCGCAGACCG CGCTCTCCGC GATCGGCCAG
TACGACGTCC GGGTGACCCC GCTCCAGGTC GCGATGGTGT CGGCGGCGAT CGCCAACGGC
GGCACGCTCA TGCAGCCGTA CCTCATCGAC CGGGTCCGGA CCCCTGACCT CTCCGTCGCG
GTCGAGACCG ACCCCGAGGA GATCGGGACG CCCATCTCGC GCTCGACCGC CGACTCGCTC
CGCGACATGA TGGTCGGGGT CGTGCAGGAC GGGACCGGGA CCTCGGCGCA GATCCCCGGC
GTGCAGGTCG CCGGGAAGTC CGGGACCGCC GAGACGACCG CGGACGCCGC GCCCCACGCC
TGGTTCACCT CCTTCGCACC GGCGGACGAC CCGCAGGTGG TCGTCGCGGT GATCGTCGAG
AACGGCGGAG ACGCCGGCAA CGAGGCGACC GGAGGTCGCG TGGCGGCCCC GATCGCCCGT
GCAGTCATGG AAGCGGTGAT CAACCGATGA
|
|---|
| Protein sequence | MNVPIRRVAV VALALFLILM GAATWIQFVQ APSLNADGRN SRSLYRELSI QRGPIVAGGQ
TIAESVPVDD AFKYQRVYSQ PEMYAAVTGY YSFRFQSTGL ERSANEYLAG TSDSLWWDRF
RNLVSGGSPQ GSSVEVTIDP VVQQAAWDAL GNQRGAVVAL DPKTGAILAL VSKPSYDPNL
VASHSAADAS AAYQALADDS ARPLDNRATA GRTYPPGSTF KLVTAAAALE DGTVTTEDQI
PAPDQLQLPQ SSRMLNNFGG ESCSPTGTMT LADALRISCN TAFAQLGMDL GPEALDDQAE
AFGFDSRMSV PLPVTPSHFP LEVDGQTIDD AQTALSAIGQ YDVRVTPLQV AMVSAAIANG
GTLMQPYLID RVRTPDLSVA VETDPEEIGT PISRSTADSL RDMMVGVVQD GTGTSAQIPG
VQVAGKSGTA ETTADAAPHA WFTSFAPADD PQVVVAVIVE NGGDAGNEAT GGRVAAPIAR
AVMEAVINR
|
|---|
| |