Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_00160 |
Symbol | |
ID | 8631655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 16140 |
End bp | 16892 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003312827 |
Protein GI | 269793372 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACCTC AGACGCACGG CCGCAGGACG TCGATCCGGG CGACCCTGTC GGTGACCCTC GTGCTCGTCC TGTCCGGGCT GCTCTTCACC GCCAACGCCC GCCTGTCGGG CGGCGAGGAG AACCGTCAGC CCGAGAACTT CGCGGAGCTG GTACGCCAGG AGGTCGACCG CGGCGACGAG CTGCTCTCCG AGGTGGAGGG CCTGCGCTCG ACCGTCGACA CCCTCAGCGC CTCGCTCGAC GTGCAGGCGC CCACCCTCGA CCCCGTCCTC GACGTCAACT CCGGCATCCA GGCCGGGATG ACCCCCGTGA CAGGACCCGG ACTGCGGGTG CAGCTCGACG ACGCGCCCAC CAACAGGCCC CAGCCCGAGG AGATCGTCCC GGACGACCTC GTGGTCCACC AGCAGGACCT CGAGGGCGTC ATCAACGCGC TGTGGGCCGG GGGAGCAGAG GCCATGACGC TCCAGGGGGA GCGGGTGACC GCCCTCACCG CGTTCCGCTG CGTCGGCAAC GTGCTCTCGC TCCACGGCCG TGTGTACTCC CCGCCCTACG TGGTCGAGGC TGTCGGCGAC CCCGACCAGC TCCGCGCGGC GCTCGACGCC TCGGGCCCGC TGAGCATCTA CCGGGAGTAC GTCGCCGCCG TCGGCCTCGG TTACGACGTG CAGGGCCAGG ACCAGATCGA CGTCCCGGCC TTCACGGGAT CGCTCACCCT CGAGCACGCC ACCGTGCCCG AGGGTGTGGA CGTGTACCGG TGA
|
Protein sequence | MAPQTHGRRT SIRATLSVTL VLVLSGLLFT ANARLSGGEE NRQPENFAEL VRQEVDRGDE LLSEVEGLRS TVDTLSASLD VQAPTLDPVL DVNSGIQAGM TPVTGPGLRV QLDDAPTNRP QPEEIVPDDL VVHQQDLEGV INALWAGGAE AMTLQGERVT ALTAFRCVGN VLSLHGRVYS PPYVVEAVGD PDQLRAALDA SGPLSIYREY VAAVGLGYDV QGQDQIDVPA FTGSLTLEHA TVPEGVDVYR
|
| |