Gene Sked_00130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_00130 
Symbol 
ID8631652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp14114 
End bp14653 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content66% 
IMG OID 
Productpeptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
Protein accessionYP_003312824 
Protein GI269793369 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCAA CCCTCCACAC CACTGCTGGT GACATCCGTA TCGAGCTGTT CCCCAACCAC 
ACGCCGAAGA CGGTGCAGAA CTTCACCGGT CTCGCGACCG GTTCCAAGAC CTGGACGGAC
CCCAAGACGG GCGCCGAGAG CAACGAGCCG TTCTACGACG GCCTCATCTT CCACCGCGTC
ATCCCGGGCT TCATGATCCA GGGTGGCTGC CCCCTCGGCA CCGGTACCGG AGACCCCGGC
TACAAGTTCG ACGACGAGAT CCACCCCGAG CTCTCGTTCA ACAAGCCCTA CCTGCTCGCC
ATGGCCAACG CCGGCACCCG CCGCAACGCC ATCACCGGCC AGCCCGAGGG CACCAACGGC
TCGCAGTTCT TCGTGTCGGT CGAGGCCACC CCGTGGCTCA ACGGCAAGCA CACCATCTTC
GGTGAGGTCG CCGACGACTC GAGCCGTGCC GTCGTCGACG CGATCGCCTC CGCGGCCACG
CGCCCCGGCG ACCGCCCGGT CGAGGACATC ACCATCACGT CCGTCACGAT CGAGGACTGA
 
Protein sequence
MFATLHTTAG DIRIELFPNH TPKTVQNFTG LATGSKTWTD PKTGAESNEP FYDGLIFHRV 
IPGFMIQGGC PLGTGTGDPG YKFDDEIHPE LSFNKPYLLA MANAGTRRNA ITGQPEGTNG
SQFFVSVEAT PWLNGKHTIF GEVADDSSRA VVDAIASAAT RPGDRPVEDI TITSVTIED