Gene Sked_00050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_00050 
Symbol 
ID8631644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp5715 
End bp6305 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content73% 
IMG OID 
Productpredicted RNA-binding protein containing Zn ribbon 
Protein accessionYP_003312818 
Protein GI269793363 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGACC CCAGGGACGG GGCGGAGCCC GACGGCGGTG AGCAGCCGGA GGACGGGCCG 
AGGCTGCCCG ACGACCGCCC CGTGAGCGAG ATCATCGAGC TCAAGGCCCC CGGGGACGTC
GCCCGTGAGG CCCTCAACCG TGCCCGCGCG GCCGCGAAGG CGAAGGGCCT CTACCCAGGT
GCCCAGCGCC GCCGCATCCT CGCCGAGCCG CGCCGCAGCG GCCCCGGCAA GGACGGGCGC
GACCCGAAGC TGTTCGCCGA GACGCTCTCC GCGTTCCTCG AGCAGCGTGG CTGGGTGCAG
GAGGTGTCGG TCGGAGGGGT CATCGGGCGC TGGCGCGAGG TGGTGGGCGA CGACATCGCG
GACCACTGCG AGCCCGAGAC CTTCGACAAC GGGATCCTCA CCGTGCGTGC CTCGTCCACG
GCGTGGGCGA CCCAGATCCG TCTGCTCGTC CCCCAGCTCC TCGGCGTCCT GGAGCGCGAG
GTCGGCCAGG ACGTGGTCCA GACGATCACC GTCCAGGGCC CAGCAGGACC CGGGTTCGGC
AAGGGATTCC GCTCGGTCCA GGGCCGTGGT GCGCGCGACA CCTACGGGTG A
 
Protein sequence
MPDPRDGAEP DGGEQPEDGP RLPDDRPVSE IIELKAPGDV AREALNRARA AAKAKGLYPG 
AQRRRILAEP RRSGPGKDGR DPKLFAETLS AFLEQRGWVQ EVSVGGVIGR WREVVGDDIA
DHCEPETFDN GILTVRASST AWATQIRLLV PQLLGVLERE VGQDVVQTIT VQGPAGPGFG
KGFRSVQGRG ARDTYG