Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_4020 |
Symbol | |
ID | 4257878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4778526 |
End bp | 4779059 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638124712 |
Product | F0F1 ATP synthase subunit delta |
Protein accession | YP_740054 |
Protein GI | 114049504 |
COG category | [C] Energy production and conversion |
COG ID | [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) |
TIGRFAM ID | [TIGR01145] ATP synthase, F1 delta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.183968 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.914332 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAT TAACCACCAT CGCTCGCCCT TACGCAAAGG CAGCTTTTGA CGTTGCTGTT GAACACAATG CAGTGGATAC CTGGGCAGAA ATGCTCACGT TTGCCGCACT GGTTAGTGAA AACGAAACCA TGCAGCCACT GCTAACTGGC TCTTTAGCTA GTACAAAACT TGCCGCACTC TTTATTAGTG TGTGTGGTGA GCAAATCAAT GAGCAAGGTC AGAACTTGAT AAAGGTAATG GCTGAAAACG GTCGCTTAAA GGTACTACCT GCTGTATCTG AGCTTTTTGC TCAATACCGT AATGAGTGGG CAAAAGAAGT GGAAGCCGAT GTGGTTTCTG CAGCTGAGCT CAGCTCTGAA CAAAAGCAGC AGATCAGTAA TTCTTTAGAG AAACGTCTCG CACGCAAAGT TAAGCTGAAT TGCAGCACTG ACGCCGCGCT TATCGCCGGT GTAATTATTA AGGCAGGTGA CTTAGTCATT GATGGCTCTG TCCGCGGTAA GTTATCGCGT CTGTCTGAAA AGCTGCAGTC GTAA
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Protein sequence | MAELTTIARP YAKAAFDVAV EHNAVDTWAE MLTFAALVSE NETMQPLLTG SLASTKLAAL FISVCGEQIN EQGQNLIKVM AENGRLKVLP AVSELFAQYR NEWAKEVEAD VVSAAELSSE QKQQISNSLE KRLARKVKLN CSTDAALIAG VIIKAGDLVI DGSVRGKLSR LSEKLQS
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