Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3954 |
Symbol | |
ID | 4255959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4696804 |
End bp | 4698039 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638124643 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_739988 |
Protein GI | 114049438 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2206] HD-GYP domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTGTA GCAGTAATCT TCTCTATGCC TTGGGGTTGC AAGATATGAG TGAGTCGGCA GAATCAGTTG ACCTAATCAG ATTACCTGTG TCGCAATTGA CGCTGGGGAT GTTTGTCAGT GCGATAGACA GAAATGATCA AGGTCGGCTC GCAATTGCAA ATGCAGGACA AATTAGGCAC AAGGATGCTA TTTCTAAATT AACCAAGAAT GGCATCAAGT ATGTTTGGGT CGACACTGAA CGCTCGGCCG AACATTGTGG TTTTAAACGT AAAGCCAGCA ACTATGGTTC ACAGGAGCCT AAAAAGCCGT TAGTCACGCG TGAAAATCAG CAGAAGCAGG CTCAGTTGAT GTTAACTGAA GCCAAAGACC TGATCCGTAA AGTCTTGTCC GAAACCTTTG AAGGCAAAGC GATTGAGGTC GCCCCCTTTG AGGCCTTAGC CGATAGCATG ATCGAATCGG TTATGCTGGA TGAAGACGCG TTGAAATGTA TGTCAGCCCT ACGTTCTAAG GATGCTTATC TGCTAGAGCA TTCAGTGAAT GTTGCCTTTC TGCTGGTTAC CTTTGGTAAA TATTTAAAGC TAGATCGTGC CATGCTTAGG GAGATGGCGG TCGGCGGCAT CTTGCACGAT ATTGGCAAGA TCAAGGTCGA TAATAAAGTC CTACACAAGC CGGGTAAGCT GACCCCTGAA GAATTCGAAC ATATGAAGCT GCATCAGGTA TATGCACTTG ATATTATGAG CGAAACTAAA GGTTTGTCTC AGATCAGCAA AGACGTTTGT CTGATGCACC ACGAAAAGTT GGATGGTCGC GGATATCCGC AGGGCTTAAA GGGCGAGGAA ATCCCACTCC ATGGACGCAT GAGTTGTATC GTCGATATCT TCGACGCCTT AACCGCCACT CGCTGCTACA AAGAGGCTAT GAGTCCCGCG GCGGCCTTTA AGATCCTACT GAGCCTGACA CCATTCCACT TAGATCAAGA GTTGGTCTAT GAGTTTATTC GTTGCATTGG TGTATACCCG GTGGGTTCTT TAGTGGAATT ATCCGATGGA CGTGTGGGTA TCGTCTGGAC CTCGAAGGAC AGGGATGTAT TACATCCGGT CGTAAAATGT TTTTATTCTT TAAAAGCAAA ACGTTATACC GAGGTGGTTA TGGTAGATCT GCTGAAGTCA GAGCTGCATA TTGAGCGCGG TGTCTCACCT AGCTCGCTGG ATATCGACCC TAAACCCTTC TACTAA
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Protein sequence | MVCSSNLLYA LGLQDMSESA ESVDLIRLPV SQLTLGMFVS AIDRNDQGRL AIANAGQIRH KDAISKLTKN GIKYVWVDTE RSAEHCGFKR KASNYGSQEP KKPLVTRENQ QKQAQLMLTE AKDLIRKVLS ETFEGKAIEV APFEALADSM IESVMLDEDA LKCMSALRSK DAYLLEHSVN VAFLLVTFGK YLKLDRAMLR EMAVGGILHD IGKIKVDNKV LHKPGKLTPE EFEHMKLHQV YALDIMSETK GLSQISKDVC LMHHEKLDGR GYPQGLKGEE IPLHGRMSCI VDIFDALTAT RCYKEAMSPA AAFKILLSLT PFHLDQELVY EFIRCIGVYP VGSLVELSDG RVGIVWTSKD RDVLHPVVKC FYSLKAKRYT EVVMVDLLKS ELHIERGVSP SSLDIDPKPF Y
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