Gene Shewmr7_3936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3936 
Symbol 
ID4257829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4676519 
End bp4677355 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content47% 
IMG OID638124625 
Producthypothetical protein 
Protein accessionYP_739970 
Protein GI114049420 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCACT GTATTAGAAT ATCGCCATAC TTTGCATCTA GATCAGATTT CGATATGGCC 
GCTCTAAAAC CCTTCATCTT AAGCACCTTA AGTGTCCTTA GCTTAACCTG TGTAAGCAAC
GGCTGGGCGA ATGAAAACTT AGTGCAAACC GAAGGCGTCA GTAGCGGCGT ATTACCCACC
TCGACAGCAG AAAGGGCAAT TAACTTAGAT TTAGGCTGGG ACAGCAAGTA TGTTTCGCAG
GGGCGTAATA ACTTGGAGCA TGGCGGTATC TATTGGATGA ATGCCAGCGT TGAGTACGGC
AACCTGACAA CCTACGCCCT TGTCGGGCGC GGCGATAGTC AGGCTTATAC AGAGTGGAAC
ATTGGCCTAG AATACGCGTT ACACTTCAGT GAAGATGTTG AAGCACATGT GGGCTATCAA
CGGATTGAAG GCTATAGCAA TAGCCGTTGT CAGGATAACG AACTGTTTGC CGAGCTGGCT
TACAATGCCG TGACCTGGTT GGTGCCTTCG GCGAGTTATG TATATTCCAC CGAGGCGGCA
GGCTATTTTA TCGAACTGAG TCTACACAGC TATTGGCAAC TTAGCGAACG CTTCATCCTC
GCCCCTTACA TTACCCAAGG ACTTGATTTT AAATATCGAA CAGAAGATCA CAATGGCCGC
AATCATCTGC AATTTGGTTT AGAGGTCAAT TATGATCTGG CCGATAATAT GAGTCTCGGT
GGCCATATTA GCCACAGTAT AGCTCAGGCG GATATTGAGC AAGAAGCCAC TGCCAATGGC
GACTTTAGCT CGCAGGATCA AACCTATGCG GGTATCCACT TCAATATCAG CTTCTAA
 
Protein sequence
MFHCIRISPY FASRSDFDMA ALKPFILSTL SVLSLTCVSN GWANENLVQT EGVSSGVLPT 
STAERAINLD LGWDSKYVSQ GRNNLEHGGI YWMNASVEYG NLTTYALVGR GDSQAYTEWN
IGLEYALHFS EDVEAHVGYQ RIEGYSNSRC QDNELFAELA YNAVTWLVPS ASYVYSTEAA
GYFIELSLHS YWQLSERFIL APYITQGLDF KYRTEDHNGR NHLQFGLEVN YDLADNMSLG
GHISHSIAQA DIEQEATANG DFSSQDQTYA GIHFNISF