Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3926 |
Symbol | |
ID | 4257819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 4663642 |
End bp | 4665249 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638124615 |
Product | AbgT putative transporter |
Protein accession | YP_739960 |
Protein GI | 114049410 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2978] Putative p-aminobenzoyl-glutamate transporter |
TIGRFAM ID | [TIGR00819] p-Aminobenzoyl-glutamate transporter family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCGA AATCCAACGA TATTCCCGTC AATTCACCAC AGGCCGACGA CATGAGTTCT CGCGGCTGGT TTGTCCGTTT TCTTAATATT GTCGAACGCT TAGGGAACCT ACTCCCCCAT CCTATTACCT TGTTCGCCCT GTTCTGTGTC GCCGTGATAT TGGTGTCAGG CATTGCGGGC TACTTTGGAT TAACAGTAAC CGATCCGCGT CCCGAGGGCG CCCACGGCCG AGGCGCCGAT GGACTTATTC ATGTGGTCAG CCTAATGAAT GCCGAAGGCT TGCGGATGAT AGTGTCCAAC TTAGTCACTA ATTTCACTGG CTTTACGCCC TTAGGCACTG TGCTGGTCGC CCTGCTGGGT GTGGGTATCG CCGAGCGTTC AGGCCTCCTA TCCGCCGCCA TGCGCGCACT CGTTATGGGC GCGTCGAAGC GTTTAGTGAC AGTGACTATA GTATTTGCCG GCATTATGTC GAACACCGCG GCTGAGCTTG GGTACGTGGT ATTAATTCCG ATGGCGGCGA TGATCTTCCA CTCCTTAGGT CGCCATCCGC TGGCGGGGCT GGCCGCGGCA TTTGCTGGGG TATCTGGGGG ATACAGCGCT AACCTATTGC TTGGTACTGT CGATCCGCTG TTATCGGGTA TCACTGAGGC GGCAGCGCGG ATGATCGATC CCGACTACAA CGTCGGCCCC GAAGTTAACT GGTACTTTAT GTTTGTCTCG ACCTTTGTGA TTACTTTCCT CGGCGCCTTT GTGACCGAGA AAATTGTCGA GCCGAAATTG GGCAAGTATC AGGGCGATAA TGCCGATGAA ACCGTGCACC AATCCATGGG CAATGTCACC GAACTGGAAA AGCGCGGCCT CAAGTGGGCG GGATTCGCTA TGCTGGTGCT AGCGGTATTC CTTGCGCTGT CAGTCGTGCC AGAGGGTGCG CCACTGCGCG ATCCTAAAAC CGGTCTGGTC TCGGGTTCGC CGTTCCTCAA AGGCATCGTC GCCTTTATCT TTATCTGTTT TGCTATCCCC GGTTTTGTCT ACGGCAAGGT CGTTGGCAGC ATTAAAAACG ATAAAGACGT GATCAATGCC ATGTCGCACA GCATGAGTAC TATGGGGCTG TATATCGTAC TGGTGTTTTT TGCGGCGCAA TTTGTGGCCT TCTTTAACTG GAGTAATCTG GGTGCCGTGT TAGCCGTGCT GGGTGCCGAT GCCCTGCAAT CCATTGGCTT AACTGGGCCA ATCCTGTTCC TGTTTTTTAT TATGATCTGT GGCTTTATCA ACTTGATGCT GGGTAGCGCT TCGGCCCAGT GGGCCATTAC CGCACCCATT TTTGTGCCCA TGCTGATGTT AGTCGGCTAT GCGCCCGAAA CCATTCAAGC GGCCTACCGT ATTGGCGACT CAGTGACTAA CTTAGTCACG CCTATGATGA GTTATTTCGG GTTGATTTTG GCCGTGGCTT GCCGTTACCA GAAAAACCTT GGCATAGGCA CGCTTATCGC CACTATGCTG CCGTACACCT TAGTATTTTT CGTCGGCTGG ACGGCGTTCT TCTTCCTGTG GGTGTTTGGC TTTGGTCTGC CAGTGGGGCC AGGCGCAGCC ACTTACTACA CGCCTTAA
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Protein sequence | MSSKSNDIPV NSPQADDMSS RGWFVRFLNI VERLGNLLPH PITLFALFCV AVILVSGIAG YFGLTVTDPR PEGAHGRGAD GLIHVVSLMN AEGLRMIVSN LVTNFTGFTP LGTVLVALLG VGIAERSGLL SAAMRALVMG ASKRLVTVTI VFAGIMSNTA AELGYVVLIP MAAMIFHSLG RHPLAGLAAA FAGVSGGYSA NLLLGTVDPL LSGITEAAAR MIDPDYNVGP EVNWYFMFVS TFVITFLGAF VTEKIVEPKL GKYQGDNADE TVHQSMGNVT ELEKRGLKWA GFAMLVLAVF LALSVVPEGA PLRDPKTGLV SGSPFLKGIV AFIFICFAIP GFVYGKVVGS IKNDKDVINA MSHSMSTMGL YIVLVFFAAQ FVAFFNWSNL GAVLAVLGAD ALQSIGLTGP ILFLFFIMIC GFINLMLGSA SAQWAITAPI FVPMLMLVGY APETIQAAYR IGDSVTNLVT PMMSYFGLIL AVACRYQKNL GIGTLIATML PYTLVFFVGW TAFFFLWVFG FGLPVGPGAA TYYTP
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