| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3923 |
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| Symbol | |
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| ID | 4257816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4660811 |
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| End bp | 4661530 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638124612 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_739957 |
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| Protein GI | 114049407 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCAA TGCATTCTTC GCCACTTTGC CTTAAGTCGA TAGCCATTAT TAGCCTTGGT
TTGTGGTTGG CTTGGGGAAG TGTTGCGGCC GCGTTTGCCG ATGAAGCTAA GTCTAAGCCC
CGTATTGTGG CCCGTTATTC TGAAAGCGGT ATTGTGAGTA ACACTGGGCA AGAAAAAGTC
AAAGTTTATC AATATCTACA GGCCAATGGC GTGACGGCTT TTACCGATAA AGCGCCGACC
ACCAATGAGT ATCAAATCCT GCTCTATGAC TGCTTTGCCT GTCGTCCTGA TTCCAAAATT
GACTGGAATG GCATTCGGTT GTTCACCCGC AATTACGATA GTTTGATCAG CCGTGCGGCC
CATAAACATC AATTAGACCC TGCACTTATC CGCGCCGTGA TCCACGCTGA GTCGGCCTTC
AACGCCAGAG CTTTGTCGCG TACTGGCGCA ATGGGCCTGA TGCAATTGAT GCCTGAAACC
GCCAAAGAGA TGGGCGTGAC CAATGCCTTT TTGCCGGAGG AGAATATTCT CGGCGGCAGT
AAGTATTTGG CGCAAATGCT AAAACAGTTC AATGGTGATA TTGCGCTAGC CTGCGCGGCC
TATAATGCGG GGCCTACCAC AGTGACCCAA TACAACGGTA TTCCTCCCTA TCCAGAAACC
CAAGCCTATG TGGAACGGGT GCAAATTCTG CTAAAACGTT ACCGCAGCGC CAAAGTCTAG
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| Protein sequence | MPAMHSSPLC LKSIAIISLG LWLAWGSVAA AFADEAKSKP RIVARYSESG IVSNTGQEKV
KVYQYLQANG VTAFTDKAPT TNEYQILLYD CFACRPDSKI DWNGIRLFTR NYDSLISRAA
HKHQLDPALI RAVIHAESAF NARALSRTGA MGLMQLMPET AKEMGVTNAF LPEENILGGS
KYLAQMLKQF NGDIALACAA YNAGPTTVTQ YNGIPPYPET QAYVERVQIL LKRYRSAKV
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