Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3881 |
Symbol | |
ID | 4257913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4603593 |
End bp | 4604399 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638124570 |
Product | competence protein ComF |
Protein accession | YP_739915 |
Protein GI | 114049365 |
COG category | [R] General function prediction only |
COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGGCG ATAGCAAATG GATTTGGTCG CAACAGGGGG CGAAGCTGTT ACACTTAGTC TCGCATTTTG GGCAGCGTTA CTTGGTGGGC AGTTTACCTA ACCGCTGCTT ACTGTGCCAC CAATCCCTAA GTGCAAAGGA AGCGGGATTC TGCCAGGTAT GCCTGCAAAC GGGCTTATAT CACAGCCCAA TTTGTTTAGG TTGTGGAAAA TCCATGCCGC TTGAACTCGA ATATTGTGGT GAGTGCCTAA GGCATCAACC GCGAAAAGTC ATCGCACCTT GCAGTTATCA TCAAGGCTTT GGTCCTTGGA TAGCGGCCAT TAAATATCAG GGGCAACTCG CCGCGTTACC CATATTGTGC CAAGCCTTAG TGGCGCGCAT TGGTCAGCTC GAACAGCAAG ACTTAATCAC TCTACCGCAG GCCATAGTGC CCGTCCCTTT ACATCCCAAT CGGCTGCGCC AACGTGGATT TAATCAAGCA TGGTTAATTG CCCATGAATT ATCGAAGCAA CTCTCGCTGC CACTGGTCAG TGACGGATTA ATTCGGCAGC AGGATACCCG CCCACAAGCT GGACTCAATG GCGTACAGCG GCGACGAAAC TTGCAAGATG CCTTTGAGTT AAATGCCGAT TTTGCCTATC AACGGATTGC CCTGGTGGAT GATGTGGTCA CTACGGGAAC CACAGTGGCA GAAATTGCCC GTTTGTTCGA GGCGCGATAT ATACAAGTGC AAATTTGGTG TCTCGCCAGA GCCGAAGCCC CGGGGTTGTT GGATGATATT GCAAGTGAAA ACTCGGGTTT TGATTAG
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Protein sequence | MSGDSKWIWS QQGAKLLHLV SHFGQRYLVG SLPNRCLLCH QSLSAKEAGF CQVCLQTGLY HSPICLGCGK SMPLELEYCG ECLRHQPRKV IAPCSYHQGF GPWIAAIKYQ GQLAALPILC QALVARIGQL EQQDLITLPQ AIVPVPLHPN RLRQRGFNQA WLIAHELSKQ LSLPLVSDGL IRQQDTRPQA GLNGVQRRRN LQDAFELNAD FAYQRIALVD DVVTTGTTVA EIARLFEARY IQVQIWCLAR AEAPGLLDDI ASENSGFD
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