Gene Shewmr7_3830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3830 
Symbol 
ID4256817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4551364 
End bp4551825 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content49% 
IMG OID638124519 
Producthypothetical protein 
Protein accessionYP_739864 
Protein GI114049314 
COG category[S] Function unknown 
COG ID[COG4103] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCTA AGCTGAAACG ATTCCTTCAA TCCCACACCC AGGCCATCTC CCCCGAGAAG 
AAAGCCCACC AGCTGAAGTT GGCGGCCGCG AGCATGTTGC TCGAAGTGGT GTTTGCCGAT
GAAACCTTGG CAGCGGAAGA AATGGCGTTA TTGCCGACAC TACTGACAGA AACATTGTCT
ATGCCAGCGC AGGAAGCCAA TGAACTGATT GAAGAAGCGA AAAAAGCCCA AGGTAATGCT
ACCTCGCTGT TTGAGTTTAC CAATACCATC AATGCCGAAT TTAGCTTGGA GCAAAAACAA
CAATTGCTGT TAGCTATGTG GCAATTAGCC TATGCCGATG GACAACTCTC CCAGTACGAA
GATCAAATTA TTCGCCGCAC CGCCGATTTG CTGTACCTCA AGCACAGCGA ACTGATCCAG
ATGCGTAATC AGGCTATCGA AGCGACCCAA ACGGCACACT AA
 
Protein sequence
MIAKLKRFLQ SHTQAISPEK KAHQLKLAAA SMLLEVVFAD ETLAAEEMAL LPTLLTETLS 
MPAQEANELI EEAKKAQGNA TSLFEFTNTI NAEFSLEQKQ QLLLAMWQLA YADGQLSQYE
DQIIRRTADL LYLKHSELIQ MRNQAIEATQ TAH