Gene Shewmr7_3814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3814 
Symbol 
ID4256801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4531740 
End bp4533203 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content50% 
IMG OID638124503 
Productpeptidase M16 domain-containing protein 
Protein accessionYP_739848 
Protein GI114049298 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCT CCTTTGTTAA ATCATCCTTT ATAAAATCAT CTCTGCAGCC GACTAAGTTA 
ATGGTCGCAT TAGCCCTAGG CACTAGCTTA GCCTTATCCG GCTGCGCCTC CACCACGGCA
CCAAAACGCG TCGATACCGG CAGCTTTGCC ATGCCAAGTT ACGACAAGTT AGTGTTAGAT
AACGGCCTTA CAGTGTATTT AATGCCACAG CGCGAAGTGC CGTTAATCAC CCTAAACGCG
GTCGTGCGTG CCGGGCCGGT AAACGACACC ACAGCGGGTA TCGCCCAAAT GACCGCCGAA
GGTTTACTCC TTGGCGCGGC GGGTAAATCC AAGGCCGAGA TTGAGCAGCA AGTGGATTTT
CTCGGCGCTA GTTTAGGGGC CGAAGCCGAC AAAGAAGGTA GTTATCTGGC CGCCGATTTT
ATGGCGAAAG ATACCGATGT CATGCTCGGC CTATTCAGCG CCGCGCTATT AAGCCCCGAC
TTTGATTCAG CAGAATTCGA CAAGCTTAAG CAGCGCGCCA TTGCGGGTTT ACAGCAGGAT
AAAGAAAGCC CGCGCGCCGT GATTGGTCGC TACTTCGATA AACTGGTGTT CGGTGCCCAT
CCTTACGGTA ATGCCTCATC GGGTAATCGC GAGTCACTTG AGCAAGTCAC AGTGTCGCAG
CTGCGCGCCT TCCACAAAAG CTACTATCAA CCTGCAAATA CCGCATTAAC TGTGGTGGGG
GATTTTGATG TGGCAGCGAT GAAGGCCAAG CTAACCCAGA CTTTTGGTCA GTGGAAAGGC
AGCGAAAAAC TCGTTCAGCC CGACTTAAAC CAAGGTTTAC CTAAGTTAAC TGACGCCAAA
GTGCTGCTGG TGGATAAGCC AGATGCGATG GAAACTACCT TTGTTATCGG TGGTTTAGGC
ATTAGCCGTG ATAACCCAGA CTATGTGGGG CTAACGGTAG TGAACACCAT TTTAGGTGGT
CGTTTTACCT CTTGGCTGAA CGATGAACTG CGGGTGAATG CGGGGCTAAC CTATGGCGCG
CGCTCCGGTT TTAGTCCTTA TACCGACTCT GGCGTGTTTA CCATTAGCAC CTTCACTAAG
ACGGAAACCA CTCAAGAAGC GATTGATTTG GCTCTGAAAA CCTATGCTCG TTTATGGGAA
AAAGGCGTCG ACCAAGCGAC TCTTGATTCG GCTAAGGCCT ATGTTAAAGG TCAGTTCCCG
CCTAAGTTTG AAACCTCGGG CCAATTGGCT GGACTCTTAT CAGGCATGTA TCTCTACGGC
TTCGATGATA AGTTTATCAA TGAGTTCCAA GCCAAAGTGG ACGGCTTAAC CTTAGAAGAA
ACCCAAAGGT TAGTGAAAAC TTACTTCCCA CAAAAAGACC TGCAGTTTGT GCTGATTGGC
AACGCCAGCA AGATTGCGCC TATCGCGGCC AAGTATGGCC AAGTGCAAAC CGTTGATATT
AATGCGGTGG GTTTTGGTCA ATAA
 
Protein sequence
MKFSFVKSSF IKSSLQPTKL MVALALGTSL ALSGCASTTA PKRVDTGSFA MPSYDKLVLD 
NGLTVYLMPQ REVPLITLNA VVRAGPVNDT TAGIAQMTAE GLLLGAAGKS KAEIEQQVDF
LGASLGAEAD KEGSYLAADF MAKDTDVMLG LFSAALLSPD FDSAEFDKLK QRAIAGLQQD
KESPRAVIGR YFDKLVFGAH PYGNASSGNR ESLEQVTVSQ LRAFHKSYYQ PANTALTVVG
DFDVAAMKAK LTQTFGQWKG SEKLVQPDLN QGLPKLTDAK VLLVDKPDAM ETTFVIGGLG
ISRDNPDYVG LTVVNTILGG RFTSWLNDEL RVNAGLTYGA RSGFSPYTDS GVFTISTFTK
TETTQEAIDL ALKTYARLWE KGVDQATLDS AKAYVKGQFP PKFETSGQLA GLLSGMYLYG
FDDKFINEFQ AKVDGLTLEE TQRLVKTYFP QKDLQFVLIG NASKIAPIAA KYGQVQTVDI
NAVGFGQ