Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3814 |
Symbol | |
ID | 4256801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4531740 |
End bp | 4533203 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638124503 |
Product | peptidase M16 domain-containing protein |
Protein accession | YP_739848 |
Protein GI | 114049298 |
COG category | [R] General function prediction only |
COG ID | [COG0612] Predicted Zn-dependent peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCT CCTTTGTTAA ATCATCCTTT ATAAAATCAT CTCTGCAGCC GACTAAGTTA ATGGTCGCAT TAGCCCTAGG CACTAGCTTA GCCTTATCCG GCTGCGCCTC CACCACGGCA CCAAAACGCG TCGATACCGG CAGCTTTGCC ATGCCAAGTT ACGACAAGTT AGTGTTAGAT AACGGCCTTA CAGTGTATTT AATGCCACAG CGCGAAGTGC CGTTAATCAC CCTAAACGCG GTCGTGCGTG CCGGGCCGGT AAACGACACC ACAGCGGGTA TCGCCCAAAT GACCGCCGAA GGTTTACTCC TTGGCGCGGC GGGTAAATCC AAGGCCGAGA TTGAGCAGCA AGTGGATTTT CTCGGCGCTA GTTTAGGGGC CGAAGCCGAC AAAGAAGGTA GTTATCTGGC CGCCGATTTT ATGGCGAAAG ATACCGATGT CATGCTCGGC CTATTCAGCG CCGCGCTATT AAGCCCCGAC TTTGATTCAG CAGAATTCGA CAAGCTTAAG CAGCGCGCCA TTGCGGGTTT ACAGCAGGAT AAAGAAAGCC CGCGCGCCGT GATTGGTCGC TACTTCGATA AACTGGTGTT CGGTGCCCAT CCTTACGGTA ATGCCTCATC GGGTAATCGC GAGTCACTTG AGCAAGTCAC AGTGTCGCAG CTGCGCGCCT TCCACAAAAG CTACTATCAA CCTGCAAATA CCGCATTAAC TGTGGTGGGG GATTTTGATG TGGCAGCGAT GAAGGCCAAG CTAACCCAGA CTTTTGGTCA GTGGAAAGGC AGCGAAAAAC TCGTTCAGCC CGACTTAAAC CAAGGTTTAC CTAAGTTAAC TGACGCCAAA GTGCTGCTGG TGGATAAGCC AGATGCGATG GAAACTACCT TTGTTATCGG TGGTTTAGGC ATTAGCCGTG ATAACCCAGA CTATGTGGGG CTAACGGTAG TGAACACCAT TTTAGGTGGT CGTTTTACCT CTTGGCTGAA CGATGAACTG CGGGTGAATG CGGGGCTAAC CTATGGCGCG CGCTCCGGTT TTAGTCCTTA TACCGACTCT GGCGTGTTTA CCATTAGCAC CTTCACTAAG ACGGAAACCA CTCAAGAAGC GATTGATTTG GCTCTGAAAA CCTATGCTCG TTTATGGGAA AAAGGCGTCG ACCAAGCGAC TCTTGATTCG GCTAAGGCCT ATGTTAAAGG TCAGTTCCCG CCTAAGTTTG AAACCTCGGG CCAATTGGCT GGACTCTTAT CAGGCATGTA TCTCTACGGC TTCGATGATA AGTTTATCAA TGAGTTCCAA GCCAAAGTGG ACGGCTTAAC CTTAGAAGAA ACCCAAAGGT TAGTGAAAAC TTACTTCCCA CAAAAAGACC TGCAGTTTGT GCTGATTGGC AACGCCAGCA AGATTGCGCC TATCGCGGCC AAGTATGGCC AAGTGCAAAC CGTTGATATT AATGCGGTGG GTTTTGGTCA ATAA
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Protein sequence | MKFSFVKSSF IKSSLQPTKL MVALALGTSL ALSGCASTTA PKRVDTGSFA MPSYDKLVLD NGLTVYLMPQ REVPLITLNA VVRAGPVNDT TAGIAQMTAE GLLLGAAGKS KAEIEQQVDF LGASLGAEAD KEGSYLAADF MAKDTDVMLG LFSAALLSPD FDSAEFDKLK QRAIAGLQQD KESPRAVIGR YFDKLVFGAH PYGNASSGNR ESLEQVTVSQ LRAFHKSYYQ PANTALTVVG DFDVAAMKAK LTQTFGQWKG SEKLVQPDLN QGLPKLTDAK VLLVDKPDAM ETTFVIGGLG ISRDNPDYVG LTVVNTILGG RFTSWLNDEL RVNAGLTYGA RSGFSPYTDS GVFTISTFTK TETTQEAIDL ALKTYARLWE KGVDQATLDS AKAYVKGQFP PKFETSGQLA GLLSGMYLYG FDDKFINEFQ AKVDGLTLEE TQRLVKTYFP QKDLQFVLIG NASKIAPIAA KYGQVQTVDI NAVGFGQ
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