Gene Shewmr7_3813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3813 
Symbol 
ID4256800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4529620 
End bp4531665 
Gene Length2046 bp 
Protein Length681 aa 
Translation table11 
GC content51% 
IMG OID638124502 
Productpeptidase S9 prolyl oligopeptidase 
Protein accessionYP_739847 
Protein GI114049297 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAGGA GACATCTAGT GAAGAAGGCA GGAATTATAC TGCTGAGTCT GCTAATGCCC 
CTCAGTACGG CATTTGCAGA AGCCAGCAAA CCACTCTCCG TCGAATTACT TTGGCAACTC
AAACGCATAG GTAGCCCTGT GGTGTCCTCC ACGGGCGAGC ACATTATTGC GCCTGTGACT
GAATACGACC TTAAGGAAGA CAAAGGTTCA ACCCAACTGT GGCGCTTCGA CGGTGAAGGT
AAAAAGAACC GGGCGATTAC CGCAAAAGGC TTAAAAGTCA GCGAGCCAGT GTTCTCGCCA
GACGGCAAAA CCTTAGCCTT TATCAGCGAA CGTAACGATG ACGACGCGGG CCAAATTTAC
CTGTTACCTA TGGATGGCCC GGGTGAAGCC AGCAAACTCA CGGACATCCC CACTGGCGTC
AATGGCATCA AGTGGGTTGG CAAGCATTTG TATTTTATCA GCAATATTTT TCCTGAGCAG
AATTGGGAGC AAATGAAGGC CCAGCTTAAA ACAGACAAAG ATAATAAAGT CTCCGCCCGC
CAGTGGAATG CGCTGCCCTA TTCGCAGTTT GATCATTGGT TAGACGAGCG CCGTCAGGCC
CATGTATTTA GGATCCCAGC CACAGGCGGC GCGGTTGAAG CCGTGACTCA GCCTTTAGGC
CATGAACTGC CTCGCTCAAG CCAAAGCAGT TCAAGCTATG ATATTTCTCC CGATGAACGC
TTAATCGCCT TTAGTGCCTA TGGTTCGGAT AATCGCGTCG ACCCTAAGTT AGACTTGTTC
CTCGCCACCA TTGGCGGCAG CAAAGCCGAC AACATCACTC CAGATAACCC AGCGCCGGAT
CTGAACCCAA CATTTAGCCC TAACGGCAAA ACCCTCGCCT TTACTCGCCA AAAAATCCCC
GGATTTTATG CCGATACCGC AAGGTTGATG CTGCTGGATG TGAGCAGTCG CAAACTCACC
ACGCTCACCG CGGATTGGGA TCGCTCAGTG TCTCAATTCG AGTGGACACC CGACAGCAAG
GGCTTCTATG CCAGCATTGA TGATGCGGCG ACAAACCGTA TTTATCATAT CGATGCCAAG
AGCGGTAAGG CCAAGGCCAT CACTCAAGCC ACCGACTTTA GCCAGCCAGC TATCGCTAAA
GATGGCCAGT TGATTGCGAC CAATCAGAGC TTTTTGTATC CCGCGCGTTT AGTCAGCATC
AACCCTCGCA ATGGTAAAAC CGAGCGTTTA GAGCAGTTTA ACGACGAGAT TTTAAAGGAT
GTCGATTTAG GCACCTATGA GTCGGTCACC TACAAGGGTT ATCAGGGCCA AGATATTCAA
ATGTGGGTGC ACTATCCACC TGGGTTCGAT CGCAGCAAAA AGTACCCGCT GTTTATGTTG
ATCCACGGTG GCCCGCACAA CGCTATTAGC GATGGTTTCC ACTTCCGCTG GAACGCGCAA
ACCTTCGCCT CTTGGGGTTA TGTCACCGCG TGGCCAAACT TCCACGGCTC TAGCGGCTTC
GGACAAGAGT TTGCCGATGC CATTAACCCA GATTGGAAAA ACAAATCCCT CGAAGATGTG
CTCAAAGCCG CAGACTGGTT TAAGCAACAA AGTTGGATCG ATAGCGATCG TATGGTCGCC
GGCGGCGCCA GCTATGGAGG CTACTTAACC TCGATTATTT TAGGTCAGCC GCATCCCTTC
AAGGCGCTGC TGATCCACGC AGCGGTGTAC GACATGTACT CACAAATGTC GGCGGACTTT
GCCGTCCACA GCACCCGCTT TGGTAACTAC TGGGATAATC CTGAGCTGTA TAAAGCCATT
TCGCCCCATT ACTTTGCCGC CAACTTTAAC ACTCCAACCT TAGTCAGCCA TGGGCAACTC
GATTACCGCG TACCCGTCGG CCAAGGTTTT GAGCTGTTCC GCACCCTGCA AACCCGTAAT
GTTGAATCGC GGATGATTTA TTTCCCCGAT GAGAACCATT GGATCATGAA GCCCAACAAC
TCCATCTATT GGTATAACCA AGTGAAGGAT TGGATGACCC ATTATGCTAA GCCCGGTGCG
CAATAA
 
Protein sequence
MIRRHLVKKA GIILLSLLMP LSTAFAEASK PLSVELLWQL KRIGSPVVSS TGEHIIAPVT 
EYDLKEDKGS TQLWRFDGEG KKNRAITAKG LKVSEPVFSP DGKTLAFISE RNDDDAGQIY
LLPMDGPGEA SKLTDIPTGV NGIKWVGKHL YFISNIFPEQ NWEQMKAQLK TDKDNKVSAR
QWNALPYSQF DHWLDERRQA HVFRIPATGG AVEAVTQPLG HELPRSSQSS SSYDISPDER
LIAFSAYGSD NRVDPKLDLF LATIGGSKAD NITPDNPAPD LNPTFSPNGK TLAFTRQKIP
GFYADTARLM LLDVSSRKLT TLTADWDRSV SQFEWTPDSK GFYASIDDAA TNRIYHIDAK
SGKAKAITQA TDFSQPAIAK DGQLIATNQS FLYPARLVSI NPRNGKTERL EQFNDEILKD
VDLGTYESVT YKGYQGQDIQ MWVHYPPGFD RSKKYPLFML IHGGPHNAIS DGFHFRWNAQ
TFASWGYVTA WPNFHGSSGF GQEFADAINP DWKNKSLEDV LKAADWFKQQ SWIDSDRMVA
GGASYGGYLT SIILGQPHPF KALLIHAAVY DMYSQMSADF AVHSTRFGNY WDNPELYKAI
SPHYFAANFN TPTLVSHGQL DYRVPVGQGF ELFRTLQTRN VESRMIYFPD ENHWIMKPNN
SIYWYNQVKD WMTHYAKPGA Q