Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3800 |
Symbol | |
ID | 4255384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4518227 |
End bp | 4519156 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638124491 |
Product | bile acid:sodium symporter |
Protein accession | YP_739836 |
Protein GI | 114049286 |
COG category | [R] General function prediction only |
COG ID | [COG0385] Predicted Na+-dependent transporter |
TIGRFAM ID | [TIGR00841] bile acid transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGTTAATA TCAACCGCTT TTTTCCGCTA TTTGCCTTAG TTGGGGCGGG TACGGCGTAT TTGATGCCCG CATGGTTTAG CGGATTGAAA ACCAGCATAG TGCCCTTGCT GGTGGTGATT ATGTTATCCA TGGGGCTGAC CTTAGATGTG CGGGATTTTG CCAATGCATT CAAACAAAAA CGTGCGGTTA TCACTGGCTT AATCTTGCAA TTTACCCTGA TGCCCTTAAG TGCCTTAGCC ATTAGTTTGC TGTTAGGGCT CAATCGGGAA TTGACCATAG GCATGGTGCT GGTGGGGAGT GTGGCGGGTG GCACGGCATC GAACGTGATT TGTTATTTGG CCAAGGGCGA TGTCGCCTTA TCTATCACTA TGACTGCGCT ATCCACCTTA GCGGGTGTGG TGCTCACCCC CTTGATTATT GAGCTATTAA TCGGTGAGAT GGTCGCTATT CCTTTAATGG ATATGCTAGT CAGCCTCGTT AAAATCGTGC TTATCCCTGT GACTGTGGGT GTGGTGTTGA ATCACTTCTT TAAGCCGCAG GTGGCTAAAC TTGCCCCCGC ATTACCCATC ATTTCTATCG TGGCGATTGT ACTGGCCATC AGCATTATTG TGGCCCTAAA TGCAGGGCAA TTTTCGCAGG TGGGGCCTGT GATTTTGCTC GCGGTGTTTC TACATAATGG TGTGGGACTC GCCTTGGGTT ATACCTGCTG CCGCTTGCTC GGCTTTAACC ATACAGTGTG TAAAACCATT TCGATTGAGG TGGGGCTGCA AAACTCAGGC CTTGCGACCG CATTATGTAT CAAGTTTTTT AGCCCGCTCT CCGCCGTCCC TAGCGCGATT TTCTCGATTT GGCATAACCT TTCTGGCGCC CTGCTGGCAG GATATTGGGC GAACTTAGAG CAGAAGAAAC AGAGCGAGGA AGTTGAGTAA
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Protein sequence | MVNINRFFPL FALVGAGTAY LMPAWFSGLK TSIVPLLVVI MLSMGLTLDV RDFANAFKQK RAVITGLILQ FTLMPLSALA ISLLLGLNRE LTIGMVLVGS VAGGTASNVI CYLAKGDVAL SITMTALSTL AGVVLTPLII ELLIGEMVAI PLMDMLVSLV KIVLIPVTVG VVLNHFFKPQ VAKLAPALPI ISIVAIVLAI SIIVALNAGQ FSQVGPVILL AVFLHNGVGL ALGYTCCRLL GFNHTVCKTI SIEVGLQNSG LATALCIKFF SPLSAVPSAI FSIWHNLSGA LLAGYWANLE QKKQSEEVE
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