Gene Shewmr7_3799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3799 
Symbol 
ID4255383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4516140 
End bp4517723 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content50% 
IMG OID638124490 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_739835 
Protein GI114049285 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAACA ATGCAAAAAC CAGCACATTG ACGGCGCTGC CCTCAGTGTT TGCGAGTATT 
TTATTGATCA TTATCGGCAT TTCCTCCTAT CGGGGCTTTG CCGAACTCAA TGACACCAGC
AGCAGACTTG TCAACAATAC CCAGCTCGCA GAGACTTTCA CGAGTGTGCG AGAATCGTTT
TTCGAGTTGC GCTTAGCGAC ATTAGTCCAT AACAGCGATG CCATCAGTAC ACAGCAACGC
AATGTGCAGC AGCTCATTGA AAAACTCGAA GACTTTAATA CCGATTTTAT GGGGCAAGAT
GCCAGAACGA TCCGCACGCT ATTACCGCAA ATTGAGCAAT ATGTGCGTCT ATATCAGCAA
GAAATCGCCT ACGCCAAACA AACTGGCACA GAACCAGAAC TTACACGCGA GCGCGGGGCT
CTTGGTCCCA AGGTAAGTCA TGAGATTAAT CAATTAGTTA AGTTGATCAC TCAACGCAAC
CATGAACTGG GTAAACAGGC AGAAGATAAA GTAAACGCCA CCGAGGCATT GCTCCTTGGC
CTAATCCTAA TTGCGATTGT CGCTTCCTTA CTAAGCGCCT TCTTTATGAG CAGACGTTTG
GTCAATATTG TTAATCAAAT CAAACGTGTT GTTGAGCGCC TTGCCGATGG CGATCTGACT
CAGAAGACTC AAATCAGTGG GCAAAACGAA CTCTGTGCGC TCGGCGCCGA TCTCGACCGA
GTGATTGACC ACTTGCGTCA TATGATTTCC GATATTGCCC AGGCCTCTGA CCATATGTCG
GATCAAATTG GTCAGTTGAA TGTGCAGTCC AATGCCAATA CCCATGCATT GCAAACCCAC
GCGGTAGAAA CCGACCAAGT GGTGACGGCC ATGACCGAAA TGAGTGCAAC TGCCCATAAC
GTTGCCGGTG ATGCCGCCTC TGCCGCACGC TTTACCCAAC AGGCAAATGA ACAGGCTGAT
AAGTCGAAAA AGGCTGTCGA ACAGGCGGCA AATACTGTCG TCGCCTTAGT TGGTAAGGTC
GATACCGCCG CCCACACCAT AGCGGAGATG AATGAAAACA CCCGTCATAT CGCCACCATC
TTAGATGTGA TTGGAGATAT CGCCGACCAA ACCAACTTAC TCGCACTTAA CGCCGCCATC
GAAGCCGCCC GCGCCGGTGA ACAAGGTCGA GGCTTTGCCG TGGTCGCCGA CGAAGTACGC
GCCCTCGCGG CTCGCACCCA AGCGAGCACG GCCGAGATCA ATCAAATGCT AGAACGCCTG
CGCACGGGTG CTAACAGCGC CGTTAATGCG ATGGATGAGA CCAAACAGAG TTGCCAAGAT
GCAGCGGACA CCACCACGCT GGTGACTGAA AGCCTTGAAA CCTTGACCAC TTATGTATTT
GATATTAATG GATTGAGCAA TCAAATCGCC ACCGCCGCCG AAGAACAAAG CGCCGTGAGT
GAAGAGATTA ATCGTAACTT GAATACCATT CGCGAAATGG TTGAAGAGTT AAATCAAAGC
GGTAAAGCAA CCCTCAATAG CGCGACCTCT TTGGCCGCCA CGAAAGAACA GCTAACAGGC
GTAGTCTCGC ATTTTAGACT CTAA
 
Protein sequence
MFNNAKTSTL TALPSVFASI LLIIIGISSY RGFAELNDTS SRLVNNTQLA ETFTSVRESF 
FELRLATLVH NSDAISTQQR NVQQLIEKLE DFNTDFMGQD ARTIRTLLPQ IEQYVRLYQQ
EIAYAKQTGT EPELTRERGA LGPKVSHEIN QLVKLITQRN HELGKQAEDK VNATEALLLG
LILIAIVASL LSAFFMSRRL VNIVNQIKRV VERLADGDLT QKTQISGQNE LCALGADLDR
VIDHLRHMIS DIAQASDHMS DQIGQLNVQS NANTHALQTH AVETDQVVTA MTEMSATAHN
VAGDAASAAR FTQQANEQAD KSKKAVEQAA NTVVALVGKV DTAAHTIAEM NENTRHIATI
LDVIGDIADQ TNLLALNAAI EAARAGEQGR GFAVVADEVR ALAARTQAST AEINQMLERL
RTGANSAVNA MDETKQSCQD AADTTTLVTE SLETLTTYVF DINGLSNQIA TAAEEQSAVS
EEINRNLNTI REMVEELNQS GKATLNSATS LAATKEQLTG VVSHFRL