Gene Shewmr7_3792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3792 
Symbol 
ID4255376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4506661 
End bp4507257 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content50% 
IMG OID638124483 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_739828 
Protein GI114049278 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTCA TGAAATTTTT GTGTGACACC AAACGCTGCA TCGAGTGTAA CGGCTGCGTC 
ACAGCATGTA AAAACGAAAA CGACTCCGCA CTTGAGTGGG GTATTCAACG TCGCCGCGTG
GTGACGATTA ACGATGGTCA ACCGGGTGAA GCATCGATTT CAGTAGCATG TATGCACTGT
ACCGACGCTC CTTGCATGGC CGTATGTCCG GCAGATTGTT TCTACCGTAC CGACGATGGC
ATTGTGCTAC ACAACAAAGA TACCTGTATC GGTTGTGGCT ACTGCTTCTA TGCCTGTCCG
TTTGGTGCAC CACAATTTCC GAAGAAAACC GCCTTCGGTA GCCGCGGTAA AATGGACAAG
TGTACTTTCT GTGCCGGTGG CCCAGAAGAA ACCTTCTCCG AAGCCGAGCA CAAGAAATAC
GGTGCCAACC GTATTGCTGA AGGCAAGCTA CCTATGTGTG CTGAGCTTTG TTCAACCAAA
GCGCTGCTTG CGGGTGATGC GGAAGTGGTA TCAAACATCT ACCGTCAACG TATGGCCTCT
CGAGGCAATC CTAACGTGAT TTGGGGCTAC AACCCAAAGA CCGGTGAGAT TAACTAA
 
Protein sequence
MAVMKFLCDT KRCIECNGCV TACKNENDSA LEWGIQRRRV VTINDGQPGE ASISVACMHC 
TDAPCMAVCP ADCFYRTDDG IVLHNKDTCI GCGYCFYACP FGAPQFPKKT AFGSRGKMDK
CTFCAGGPEE TFSEAEHKKY GANRIAEGKL PMCAELCSTK ALLAGDAEVV SNIYRQRMAS
RGNPNVIWGY NPKTGEIN