Gene Shewmr7_3780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3780 
Symbol 
ID4255364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4488687 
End bp4488953 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content50% 
IMG OID638124467 
Productpeptidase 
Protein accessionYP_739816 
Protein GI114049266 
COG category[S] Function unknown 
COG ID[COG3212] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAACA GCCCAAGCTG TCTAGCCCAT GATGAAGACC TCTCCAACAA AGTGGTCGAA 
TGGGTGAAGG AGGGTAAAGT ATTACCCTTC GACACCATCA TGCAACGCTA TGAGTCGCGC
CTTAAGGGGC GCTTGCTCGA CCTCGAGGTC GAGCAAAAAC ACGGGCGCAT CATTTATGAA
CTCGAAATCC TGCGCGACGA TGGCGTGGTC TATGAGATTA AGATCGATGC CAAAACGGGT
GAATGGCTTA AGGAAAAGGT CGACTGA
 
Protein sequence
MINSPSCLAH DEDLSNKVVE WVKEGKVLPF DTIMQRYESR LKGRLLDLEV EQKHGRIIYE 
LEILRDDGVV YEIKIDAKTG EWLKEKVD