Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3773 |
Symbol | |
ID | 4255357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4484060 |
End bp | 4484821 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638124460 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_739809 |
Protein GI | 114049259 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACAA CTCCCATCGC GCTGATCACC GGTGCAAGCC GTGGCTTAGG TAAAAATGCG GCCCTGACCT TAGCCGCACA AGGTGTTGAT ATTATTCTAA CTTACCAAAG TAATGCCGCT GCGGCCGCCG AGGTGGTTGC GGAAATTGAA TGGCACGGAC GCAAGGCTGT CGCGTTACCG TTAGATGTGG GTGATAGCCA GTCCTTTAGC GATTTTTCTC AACGCGTTAA AACCGCGCTC GAACAGACTT GGCAGCGGGA TAGTTTTAAC TATCTAGTTA ATAATGCTGG GATTGGTATC CATGTGCCTA TGGCTGAAAC CAGTATGGAG CAGTTCGATA CTTTGATGAA TATCCATGTC AAAGGACCTT TCTTTTTAAC TCAGGCGTTG CTGCCTCTGC TTGCCGATAA TGGCAGTATT ATCAATGTCT CTACGGGGTT AACGCGCTTT GCTGTTCCGG GATTTGGTGC CTACGCCACT ATGAAAGGCG CGGTCGAAAC CATGACCAAA TACTGGGCGA AGGAGCTTGG TCCACGCGGG ATTCGCGTTA ATGTGCTGGC TCCCGGTGCA ATCGAAACGG ACTTTGGTGG CGGTGCCGTT CGGGATAACC GACAGATGAA TGAGTTTTTA GCGCAGCAAA CGGCGCTGGG GCGGGTGGGA TTACCCGAGG ATATTGGCGG TGCCATCAGT GTCTTGTTGT CACCCGCCGC GGCGTGGATA AACGCACAAC GTATCGAGGC ATCTGGCGGT ATGTTCTTAT AG
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Protein sequence | MNTTPIALIT GASRGLGKNA ALTLAAQGVD IILTYQSNAA AAAEVVAEIE WHGRKAVALP LDVGDSQSFS DFSQRVKTAL EQTWQRDSFN YLVNNAGIGI HVPMAETSME QFDTLMNIHV KGPFFLTQAL LPLLADNGSI INVSTGLTRF AVPGFGAYAT MKGAVETMTK YWAKELGPRG IRVNVLAPGA IETDFGGGAV RDNRQMNEFL AQQTALGRVG LPEDIGGAIS VLLSPAAAWI NAQRIEASGG MFL
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