Gene Shewmr7_3641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3641 
Symbol 
ID4256139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4320472 
End bp4321638 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content49% 
IMG OID638124325 
ProductHemY domain-containing protein 
Protein accessionYP_739678 
Protein GI114049128 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3071] Uncharacterized enzyme of heme biosynthesis 
TIGRFAM ID[TIGR00540] hemY protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAGG CATTGATATT TCTTGGGATC ATATTAATAG GTTTGTGTAT TAGCCCTTGG 
ATTGTTGGCA ACACTGGCTA TGTGTATATT GCCGCGGGTG ATTACCAGCT TGAGACCAGT
TTAGTCTTTG GGATCATCAT GTTAATCGTG TTCTATGCCC TATTCCAAGT GCTGGAATGG
CTAGTGATCA CTGTGATAAA TCTGCTGCTT CGCAGCCGTT TTATCCCGCA GCACTGGCGT
CGCCGCTCCG CCAAGAAACA CACCCTAATC GGCGCACTCG CCATTGCCGA AGAAGATTGG
CCAGCGGCAG AACGCGCCAT GATTAAAGGG GCAGACAACG GTGAACTGCC GGCGTTAAAT
TTGTTAGCCG CAGCACGTGC CGCGCAACAT CAAAATAAAA TCGCCGAACG AGATCAATAT
CTTGCCCGCG CCGAAGCCCA ACCTATGACG GCCAATGCGG TGGCGACCAC TCGCACCCGT
TACTTGCTCA AGCAAGGGGA ATTAACTTTA GCCAGAGCCG AGCTCGATAA GTTAGCCCCA
ACCAGCAAGA GCAAAGCCCC AGTACTCAAA CTCGCCCTTG AACTGTACTG CGCGCAAGAA
GATTGGGAGG CGCTTAAGCT ATTGCTGCCA ATACTGAAGA AACGCCAGAT CTTAGATGAT
GCAAAGTTAA ATGCACTGAG TGTTGAAACC CATTGCGCCC TGTTAAAAGC TGCGAGTCTT
AAAGGGGAAG ATGCCCTAGA GCAATGCTGG CAATGGCTCT CCCGTGATGA ACGTAATCAG
CCAGAGTTTT TAGCAATTTA TGCCATGGGC TTATGCCGCT TCAATCGCAA AGATCAAGCC
CTTAAATTAC TCTCGAAAAA GCTACGTAGC TCGCCAGAGT CGGCACTGTT AGAAGTGATA
CCACAAATAG TCACCGCCCA TGACGAAGAG ATCCGCAAGC AATTACTCAA GCATGAAATC
ACCCATGAGA ACAATGCTGA TTATCAAAAG TGCTTAGCGC TGTTGTATCA ACAAACCCGC
GACATGAAAG AAGCTAAAAC CTGCTGGCAG AATGTGTGTC GTCTCGCCCC AAGCCAAGCG
TCTTGGTTAT CACTTGCCCG TATTCAAGAA CAACTCGGCG AACAAGGTAA CGCGAATCAA
AGTTATCGCC AGGCGGTTAA CCTGTAA
 
Protein sequence
MIKALIFLGI ILIGLCISPW IVGNTGYVYI AAGDYQLETS LVFGIIMLIV FYALFQVLEW 
LVITVINLLL RSRFIPQHWR RRSAKKHTLI GALAIAEEDW PAAERAMIKG ADNGELPALN
LLAAARAAQH QNKIAERDQY LARAEAQPMT ANAVATTRTR YLLKQGELTL ARAELDKLAP
TSKSKAPVLK LALELYCAQE DWEALKLLLP ILKKRQILDD AKLNALSVET HCALLKAASL
KGEDALEQCW QWLSRDERNQ PEFLAIYAMG LCRFNRKDQA LKLLSKKLRS SPESALLEVI
PQIVTAHDEE IRKQLLKHEI THENNADYQK CLALLYQQTR DMKEAKTCWQ NVCRLAPSQA
SWLSLARIQE QLGEQGNANQ SYRQAVNL