Gene Shewmr7_3631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3631 
Symbol 
ID4256129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4310483 
End bp4311382 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content51% 
IMG OID638124315 
Producttyrosine recombinase XerC 
Protein accessionYP_739668 
Protein GI114049118 
COG category[L] Replication, recombination and repair 
COG ID[COG4973] Site-specific recombinase XerC 
TIGRFAM ID[TIGR02224] tyrosine recombinase XerC 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.465228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGC AGTGTCGGAC CTATTTACAG CAGTTTGAAA CCTATATGCA GTCTGAGCGC 
CAGTTATCGG CGCATACGGT TCGCAATTAT ATGTATGAAT TGCAGCGGGG AAGCGAGTTA
CTGCCCGAGG GCGTCGATCT GCTCAATGTG GGCCGTGAGC ATTGGCAACA GGTGCTTGCT
AAGCTGCACC GCAAGGGCTT GAGCCCGCGC TCGCTATCAT TGTGGTTGTC GGCCATCAAA
CAATGGGGAG AGTTTTTATT ACGCTCAGGC GTGATTGAAC TTAATCCTGC CAAGGGGCTG
AGTGCGCCCA AACAAGCCAA ACCGTTACCG AAGAATATCG ACGTCGATTC TATCTCGCAT
CTGCTCGCGA TTGAGGGCAA TGATCCGCTG ACCCTGCGTG ATAAAGCCAT TATGGAGCTG
TTTTACTCCA GTGGATTGCG CTTGGCTGAA CTGGCGGCGC TGGACTTATC CAGTGTGCAA
TACGACCAGC ATGAAGTGCG CGTGTTAGGC AAAGGCAACA AAGAGCGCAT CGTCCCCGTT
GGGCGTTACG CCATAGAGGC CATCAGCGCT TGGCTCAAGT GCCGCAAACA AATTTCCTGT
GAAGATAATG CATTGTTTGT CACGGAGAAG GGCAAGCGTT TGTCCCATCG CAGTATTCAG
GCGCGCATGA GTAAATGGGG TCAGGAGCAG GCACTTTCTA TGCGGGTGCA TCCCCATAAG
TTACGCCATT CCTTTGCGAC GCACATGCTG GAATCTAGTG CCGATTTACG GGCGGTGCAG
GAATTATTAG GCCACGAAAA CCTGTCGACC ACGCAAATTT ATACCAGTTT AGATTTCCAA
CACTTAGCTA AGGTGTATGA TAACGCCCAT CCTAGAGCGA AAAAACAACA GGATAAATAA
 
Protein sequence
MTPQCRTYLQ QFETYMQSER QLSAHTVRNY MYELQRGSEL LPEGVDLLNV GREHWQQVLA 
KLHRKGLSPR SLSLWLSAIK QWGEFLLRSG VIELNPAKGL SAPKQAKPLP KNIDVDSISH
LLAIEGNDPL TLRDKAIMEL FYSSGLRLAE LAALDLSSVQ YDQHEVRVLG KGNKERIVPV
GRYAIEAISA WLKCRKQISC EDNALFVTEK GKRLSHRSIQ ARMSKWGQEQ ALSMRVHPHK
LRHSFATHML ESSADLRAVQ ELLGHENLST TQIYTSLDFQ HLAKVYDNAH PRAKKQQDK