Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3628 |
Symbol | |
ID | 4255047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 4308527 |
End bp | 4309030 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638124312 |
Product | putative transcriptional regulator |
Protein accession | YP_739665 |
Protein GI | 114049115 |
COG category | [K] Transcription |
COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000786438 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATACC CAACATTCGC ACTCGATGAT ATTGGTTCAC TGCATGAGTC CGCCCAAGTG GAGTTCAAAC TCGCGCGGGG ACGCGATGGT CAAGGTCAGC TCCCCGAAGA TATTTGGGCG ACCTATAGCT CCTTCGCTAA CACCTTAGGT GGCGAAATTA TCCTCGGGGT ACGTGAAGAA CATGGGCATT TCACCATTGA AGGCATTCCG AATCCCCTGC CCGTGTTACA GGAGTTTTGG GAAATCCTCG ATGATCCAAG CCGCACCAGC CATAATATCC TAGCGATTTC TGATGTGCAG CTAATCGAAA TTATGAATAA AAAGCTGATA AGGATTCGCG TGCCACTCGC GTCAGAACAC CTAAAGCCCG TGTTTATCGG CACAGATGTC TACACTGGTA GCTATTTTCG CGTGGGGGAT GCCGACATGC ACGCCAGCCG AAGACAAGTC ACGCAAATGC TGCGCCGCGC CCATCATTGC ACTAAGCAAC TCAAGGCGCG TTAA
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Protein sequence | MTYPTFALDD IGSLHESAQV EFKLARGRDG QGQLPEDIWA TYSSFANTLG GEIILGVREE HGHFTIEGIP NPLPVLQEFW EILDDPSRTS HNILAISDVQ LIEIMNKKLI RIRVPLASEH LKPVFIGTDV YTGSYFRVGD ADMHASRRQV TQMLRRAHHC TKQLKAR
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