| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3605 |
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| Symbol | |
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| ID | 4255024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 4286399 |
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| End bp | 4288108 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638124289 |
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| Product | type IV-A pilus assembly ATPase PilB |
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| Protein accession | YP_739642 |
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| Protein GI | 114049092 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.464844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACAT CAGGTCTTCA TTTAGGTTTA TCCACTCTTT TTATCCGTAA AGGGCTGCTA
AATGAAGAGC AGATGGCGAA TGCCATCACT AAATCCCGTC AGACTAAACA GACTTTAGTG
ACTACCTTAG TCCAAACCCA ACTGATTTCC GCTCGTTCGA TTGCAGAGCT TTGCTATGAA
GAGTACGGCA CCCCACTACT CGATTTAGCT GAATTTGATA TTAGCGCCAT TCCAGAAGAA
TTTATTAATA AAAAACTGAT TGAAAAACAC CGCTGTCTAC CGCTCTTTAA ACGCGGTAAT
CGTCTCTATA TCGCCACCTC AGATCCAACT AATATTGCTG CACTTGAAGA GTTTCAATTT
AGTGCAGGCC TACATGCCGA AGCCATCCTA GTTGAAGAAG ATAAACTCGC TAAAGCCCTT
GAAAAGGTAT TAGAAGAAGA TATTACGGGC CTCGATCTAG GCGGTATGGA CGAGGCGGCT
TTAGCGGGTA TTGAGATTGC TGATACCGAT AAGCGACAAG AAGAAAATAC AGGTGATGGC
AGTGATGATG CACCAATCGT CATTTATATC AATAAGATAT TAACCGATGC CATACGTAAA
GGGGCATCAG ATCTTCACTT TGAGCCCTAT GAAAAACGCT ACCGCATTCG TTTCCGTATC
GATGGTATTT TGCATGAAGT CTCCGAGCCG CCGATTAGCC TAGCAGGGCG TTTATCTGCT
CGTTTAAAGG TGATGTCGAA ACTCGATATT GCCGAGCGCC GCGTCCCTCA GGATGGACGG
ATTAAGATGA AGCTGTCCCG CACTAAGTCC ATCGACTTTC GGGTGAGCAC GCTGCCGACG
CTCTGGGGCG AAAAAATTGT AATGCGGATA TTAGACTCCT CCTCCGCACA GCTCGGCATT
GAAAAACTGG GTTATGAACC TGACCAAGAA AAGCTCTACC TTGAGATGCT AGCTAAACCC
CAAGGAATGA TCTTAGTCAC AGGCCCAACG GGTTCGGGTA AAACCGTTTC ACTTTATACA
GGCTTAAATA TCCTCAATAC CGCCGAGCGC AATATCTCTA CCGCCGAAGA TCCGGTAGAA
ATTAACCTTG AAGGTGTCAA CCAAGTCCAT ATTAATTTAA AAGCGGGTTT AACCTTTGCC
TCGGCACTGC GCTCCTTTTT GCGTCAAGAC CCCGATGTGG TAATGGTGGG TGAGATCCGT
GACCTTGAGA CCGCCGAAAT TGCTATTAAG GCTGCACAAA CTGGCCACTT AGTATTATCC
ACCCTGCACA CAAACTCGGC GGCGGAAACC TTAACCCGTT TAATCAATAT GGGTGTACCT
GGCTATAATA TCGCCAGTTC GGTGAATCTT ATTATTGCTC AGCGACTTGC AAGACGGCTT
TGCACTGAAT GCAAGCAACC CGAACAAATT CCTGAACATG AGTTACAACG TTTAGGCTTT
ACCGATGAAC AAATAACTCA AGGATTTACC ACCTATAAAC CTGTAGGTTG TGAGCATTGT
TCTGGCGGAT ATAAAGGACG GGTCGGTATT TACGAAGTAA TGAAAATGTC CGATGAAATC
GCCCGCACTA TTATGGAAGG CGGTAATTCA TTACAAATTG CCGAGCAAGC CAAAGCACAG
GGGATGCGCG ATCTGCGTCA ATCTGGCCTA CTTAAAGTGA TCCAAGGGGT AACCAGTATT
GCCGAAGTGA ACCGAGTCAC CAGCTTTTAA
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| Protein sequence | MPTSGLHLGL STLFIRKGLL NEEQMANAIT KSRQTKQTLV TTLVQTQLIS ARSIAELCYE
EYGTPLLDLA EFDISAIPEE FINKKLIEKH RCLPLFKRGN RLYIATSDPT NIAALEEFQF
SAGLHAEAIL VEEDKLAKAL EKVLEEDITG LDLGGMDEAA LAGIEIADTD KRQEENTGDG
SDDAPIVIYI NKILTDAIRK GASDLHFEPY EKRYRIRFRI DGILHEVSEP PISLAGRLSA
RLKVMSKLDI AERRVPQDGR IKMKLSRTKS IDFRVSTLPT LWGEKIVMRI LDSSSAQLGI
EKLGYEPDQE KLYLEMLAKP QGMILVTGPT GSGKTVSLYT GLNILNTAER NISTAEDPVE
INLEGVNQVH INLKAGLTFA SALRSFLRQD PDVVMVGEIR DLETAEIAIK AAQTGHLVLS
TLHTNSAAET LTRLINMGVP GYNIASSVNL IIAQRLARRL CTECKQPEQI PEHELQRLGF
TDEQITQGFT TYKPVGCEHC SGGYKGRVGI YEVMKMSDEI ARTIMEGGNS LQIAEQAKAQ
GMRDLRQSGL LKVIQGVTSI AEVNRVTSF
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