| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3599 |
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| Symbol | aceE |
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| ID | 4255018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4278154 |
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| End bp | 4280820 |
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| Gene Length | 2667 bp |
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| Protein Length | 888 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638124283 |
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| Product | pyruvate dehydrogenase subunit E1 |
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| Protein accession | YP_739636 |
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| Protein GI | 114049086 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
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| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.172197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAG ATATGCTACA AGACTTAGAT CCGTTAGAGA CTCAGGAATG GGTTGACGCC
CTGCAAGCTG TATTAGAACA GGAAGGCCCT GAGCGCGCCC ATTTCTTATT AGAGAAACTG
ATCGATAAAG CCCGTCGCAA TGGCACACAC TTGCCTTACA CTGCGACCAC GGCCTATTTG
AACACCATTC CAGCGGGTCA AGAGCCGCAC ATGCCTGGCA ACCAAGAGAT GGAACGTCGC
ATTCGCGCCA TCATCCGTTG GAACGCCTTA GCTATGGTTC TGCGTGGTTC TAAGAAAGAT
TTAGAGTTAG GCGGCCATAT TTCGAGTTTC GCGTCGAGCG CAACCATTTA TGACGTGTGC
TTTAACCACT TCTTCCGTGC GCCAAACGAG AAAGACGGCG GCGACTTAGT GTATTTCCAA
GGCCATATCG CTCCAGGTAT CTACGCGCGT TCATTCTTGG AAGGTCGTTT AACTGAAGAC
CAACTGGCTA ACTTCCGTCA AGAAGTGGAT GGCAAAGGTT TATCTTCTTA TCCGCACCCT
AAGTTGATGC CTGACTACTG GCAATTCCCA ACGGTTTCTA TGGGTCTGGG TCCAATCCAA
GCGATTTACC AAGCGCGCTT CTTAAAATAC CTGACTGACC GTGGCCTGAA AGATTGTTCT
GATCAAACCG TTTACTGCTT CTTAGGTGAC GGTGAGTGTG ACGAGCCAGA AGCCTTAGGT
GCTATCGGTT TAGCCGCTCG TGAAGAATTA GACAACCTAG TCTTCATCAT CAACTGTAAC
CTGCAACGTC TGGACGGCCC AGTACGCGGT AACGGTAAGA TTATCCAAGA ACTGGAAGGT
GAATTCCGCG GCGCTGGCTG GGAAGTGGTT AAAGTGATTT GGGGTCGTTA CTGGGATCCA
TTATTAGCCC GTGATACCAG CGGTAAGTTA CTGCAGTTAA TGGAAGAAAC CGTTGACGGT
GAATACCAAA ACTGTAAAGC CAAAGGTGGC GCTTATACTC GCGAACACTT CTTCGGCAAA
TATCCAGAAA CCGCCGAAAT GGTAGCGAAC ATGTCAGATG ATGACATTTG GCGCTTAAAC
CGTGGTGGTC ATGACCCAGT TAAAGTGTAC GCGGCATTAG ACCATGCGCG TAAGACTAAA
GGTCGTCCAA CAGTGATCCT AGCGAAAACC GTTAAAGGTT ACGGCCTAGG TGATGCGGGT
GAAGGTAAGA ACATCGCACA CAACGTGAAG AAAATGGGTA TCGAGTCTAT CCGTTACTTC
CGCGATCGTT TCAATATCCC CATTCCAGAC GATCAATTAG AAGATCTGCC GTTCTACCAC
CCAGGTCCAG ATTCGGAAGA AGTGAAGTAC ATGATGAGCC GTCGTGCCGA GCTGCATGGC
AGCGTGCCAC AACGTCGTGA GAAGTTCAGC GAAGAGCTGG AAATCCCATC ACTGAAGATT
TTTGACTCGA TTCTGCAGGG TTCTAACGGC CGTGAAATTT CGTCAACGAT GGCGTTTGTT
CGCGTGCTGA CAGCACTGTT AAAAGACAAG AAGATTGGCA AAAACATCGT GCCAATTATT
CCTGACGAAG CGCGTACCTT CGGTATGGAA GGTCTGTTCC GTCAAGTGGG TATTTATGCT
CACGAAGGCC AAAAATACGT TCCGCAAGAC TCTGACCAAG TGGCTTACTA CCGTGAAGAT
AAGTCAGGCC AAGTACTGCA GGAAGGTATT AACGAATTAG GTGCTATGTC ATCTTGGGTA
TCGGCTGCGA CCAGCTACTC AGTGAACGAT GTGCCAATGA TCCCATTCTA CATCTACTAC
TCAATGTTCG GTTTCCAACG TATTGGCGAC ATGGCTTGGG CAGCGGGTGA TATGCGTGCT
CGCGGCTTCT TAGTCGGTGG TACTTCTGGC CGTACAACCT TAAACGGTGA AGGTCTACAG
CATCAGGACG GTCACAGCCA CGTACTGGCT AACACCATTC CTAACTGTAT TACCTACGAT
CCAACTTACG GTTATGAAAT TGCCGTTGTG GTACAAGATG GTATTCGTCG TATGTACGGC
GAGAACCAAG AAGATATCTT CTACTACCTG ACCACAATGA ACGAAAACTA CGAGCAGCCA
GCCATGCCAG AAGGCGCAGA AGTTGGCATC GTTAAAGGTA TCTACAAGTT AGAAACCGTT
GCCGGATCAG GTAAAGGCAA AGTTCAATTA ATGAGCTGTG GCACCATTCT TGAGCAAACC
CGCAAAGCGG CTCAAGCACT GGCAAAAGAC TTCGGTATCA CTGCCGATGT ATTCAGCGTA
ACCAGCTTCA ACGAACTGAC TCGCGATGGT CAAGCGGTTG AGCGTTGGAA CATGCTGCAC
CCAACTGAAA CGCCAAAACA AGCGTATATC AGCCAAGTGA TCTCCAGTGA TGCGCCTGCA
ATCGCAGCGA CTGACTACAT GAAGATCTAC GGCGAGCAGT TACGTGCATA CATGCCAACC
GATTACAAAG TGTTAGGTAC TGACGGTTTC GGTCGTTCAG ACAGCCGTGA CAACCTGCGT
CACCACTTCG AAGTGGACGC TAAGTTCATC GTTATCGCGG CACTGAAGTC ACTGGTTGAT
CGTAAAGAGC TGCCTGTTGA TGTGTTAGCG AATGCCATCA AGGAATACGG CATCGACGCT
GACAAGATCA ATCCACAGTA CGCGTAA
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| Protein sequence | MSEDMLQDLD PLETQEWVDA LQAVLEQEGP ERAHFLLEKL IDKARRNGTH LPYTATTAYL
NTIPAGQEPH MPGNQEMERR IRAIIRWNAL AMVLRGSKKD LELGGHISSF ASSATIYDVC
FNHFFRAPNE KDGGDLVYFQ GHIAPGIYAR SFLEGRLTED QLANFRQEVD GKGLSSYPHP
KLMPDYWQFP TVSMGLGPIQ AIYQARFLKY LTDRGLKDCS DQTVYCFLGD GECDEPEALG
AIGLAAREEL DNLVFIINCN LQRLDGPVRG NGKIIQELEG EFRGAGWEVV KVIWGRYWDP
LLARDTSGKL LQLMEETVDG EYQNCKAKGG AYTREHFFGK YPETAEMVAN MSDDDIWRLN
RGGHDPVKVY AALDHARKTK GRPTVILAKT VKGYGLGDAG EGKNIAHNVK KMGIESIRYF
RDRFNIPIPD DQLEDLPFYH PGPDSEEVKY MMSRRAELHG SVPQRREKFS EELEIPSLKI
FDSILQGSNG REISSTMAFV RVLTALLKDK KIGKNIVPII PDEARTFGME GLFRQVGIYA
HEGQKYVPQD SDQVAYYRED KSGQVLQEGI NELGAMSSWV SAATSYSVND VPMIPFYIYY
SMFGFQRIGD MAWAAGDMRA RGFLVGGTSG RTTLNGEGLQ HQDGHSHVLA NTIPNCITYD
PTYGYEIAVV VQDGIRRMYG ENQEDIFYYL TTMNENYEQP AMPEGAEVGI VKGIYKLETV
AGSGKGKVQL MSCGTILEQT RKAAQALAKD FGITADVFSV TSFNELTRDG QAVERWNMLH
PTETPKQAYI SQVISSDAPA IAATDYMKIY GEQLRAYMPT DYKVLGTDGF GRSDSRDNLR
HHFEVDAKFI VIAALKSLVD RKELPVDVLA NAIKEYGIDA DKINPQYA
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