| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3578 |
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| Symbol | |
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| ID | 4257963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4242852 |
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| End bp | 4244471 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638124262 |
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| Product | PepSY-associated TM helix domain-containing protein |
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| Protein accession | YP_739615 |
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| Protein GI | 114049065 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTTC GCAGTGATGT GTTACGGGTG TATCAGTCTA TCCATATTTG GACTGGGATT
ATCGCCGGAA TAGTGTTGTT TATCGGTTTC TATGCCGGAT CGCTCACTAT GTTTAAAGGT
GCGATTGAGG CTTGGTCAAT GCCGCCCTCT GTGACTTTGC CGCAAGTCTC AAGCGAGAGG
CTCGATGAGT TAGTGTCGCA GGTGCTAGCG CGGGACGATA AGGCGAAAAA CGGCTTTAGT
TTGCACTTGA ATGATGAACA TCAGTCGCCG ATGACCTGGT ATCAGCAGGG CTCGGAGCGT
GAACTCAGCA TGAGTAACCA GCTTTGGCAT GCTAGCCTCG ACGAGCAGGG ACAATTAGTG
ACTCAACTGA GTACCCCAAG CGAGTTGGCC GAGCTGATTG ACCAATTACA CCGCACTGCG
GGGATTGCCG GTGAAGTGGG TCACGATCAA GCGGGTGTCT ATGTGCTCGG CGTCGCCGCC
TTCTTATACT TCTTGGCGTT GGTTTCAGGG GTGATTTTCT TACTGCCCAC CTTAACTAAA
AGCTTTTTCG CCCTACGTAA AGACAAGGGC GAAAGCCGTT TCTGGCTCGA TGCCCACAAC
TTAGTCGGCA TTACCAGTTT GCCATTTCAT CTGGTGATCA GTCTGACCGT GATAGTGTTT
GCCTTCCATG ATCAGCTTTA CGATGGGCTC AAGCAGGTGG TTTATGGAGA AAAACCGCTG
TTTGCCCAAC CCGCACCCGA CAGAACGCCC TATACGCTCG CCGATTTGCC TAAGGTCAGC
ACAGTTCTGA CTAAGGTGCA GGAGCTCGCC CCCGAGTATC AAGTGCATGA AATGACCTTT
ATGAACTTGA ATAATCCCCG TGCGACCTTG CGTTTAGGCC TATACAACCC TAACGGTTTT
ATGCGCGGGC CAGTTACCGA TTACTTATAT CTGCATCCCT ATAGCCTCAA GATAACCAAC
AGCACCATTG ACCAGAGTGA CAAGGGCATT TGGGCTAGAA CGGTTGCGGT ATTCTTTGGG
CTGCACTTTG GCAGTTACGG GGGCGATCTT GGGCGCTGGG TGTATTTCTT TTTAGGCTTG
AGCGGCGCTT TTTTATTTTA CAGCGGTAAT TTGCTGTGGC TGGAAAAGCG CCGTAAAAAA
CAGGCGAGTG AGCAGACGCG TGCCTGCCGC TTAATGGCTA GCGCCACCGT GGGGATTTGC
TTAGGTTCGG TTGCCGCTCT GGCGGTGAGC ATGCTGCTGG GGAAATGGTT CTACTCACAG
GTGAGCAATA TTAATCATCT CTATCTGTGG TTGTACTATG TCGTCTTCGC CGCCTTAGTG
GCCTATGCCT TCTGGCGCGG CGCGGCTAGG GCGGCACTGC TGATTTTACC TCTGTGCGCC
TTGGCGACTC TGGCTATGCC TATCACCTCT GTGATTGGGT TGTTAGTACC GAGTCTAGGC
TTATGGGCGC CCCATTCTGG GGCAACGCTT GGGGTCGATC TCGTGGCGCT CGGCTTTAGT
GGGCTGTTCT ACTATGGATA CCGACTCACG CGCCATCGCG TATTCAATGG CCCGCAGGAC
AGTGTCTGGG CGATTCCCAA TAAGGATGCT GTGGTCGAGA CCGCTTCAAA AACAGTTTGA
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| Protein sequence | MKVRSDVLRV YQSIHIWTGI IAGIVLFIGF YAGSLTMFKG AIEAWSMPPS VTLPQVSSER
LDELVSQVLA RDDKAKNGFS LHLNDEHQSP MTWYQQGSER ELSMSNQLWH ASLDEQGQLV
TQLSTPSELA ELIDQLHRTA GIAGEVGHDQ AGVYVLGVAA FLYFLALVSG VIFLLPTLTK
SFFALRKDKG ESRFWLDAHN LVGITSLPFH LVISLTVIVF AFHDQLYDGL KQVVYGEKPL
FAQPAPDRTP YTLADLPKVS TVLTKVQELA PEYQVHEMTF MNLNNPRATL RLGLYNPNGF
MRGPVTDYLY LHPYSLKITN STIDQSDKGI WARTVAVFFG LHFGSYGGDL GRWVYFFLGL
SGAFLFYSGN LLWLEKRRKK QASEQTRACR LMASATVGIC LGSVAALAVS MLLGKWFYSQ
VSNINHLYLW LYYVVFAALV AYAFWRGAAR AALLILPLCA LATLAMPITS VIGLLVPSLG
LWAPHSGATL GVDLVALGFS GLFYYGYRLT RHRVFNGPQD SVWAIPNKDA VVETASKTV
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