| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3532 |
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| Symbol | |
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| ID | 4256924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4187659 |
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| End bp | 4188942 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638124216 |
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| Product | lysine decarboxylase transcriptional regulator, CadC |
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| Protein accession | YP_739569 |
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| Protein GI | 114049019 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATAAAA TCACTTCATA CCTAATGTTA GATGAACAGG CCAAAGAGCT TGTTGACCAT
GTTCATGGAA CCCAGATCGG CCTGACTTTT TCAGAAACCG CCGTACTTGT ATTGCTGTTA
TCTGCCCCGA ACGCGATTTT TACCAAGGAA GAATTGCTGC AAGTCGGCTG GCCAGAACGT
GTGGTCGCGC CTACCTCATT AACTCAGTGC ATCAGTACCT TACGTAAAAA GTTAGAGCCT
TATACCGAAG TGCAGCTCAA AACGGTGGCG CGTCGCGGTT ATCAGTTGCA TGTGTCCGAA
CAGTCCCATG TGAAGATGTT GGCGATTAAC GATGCCGATG CGATCCGCGA TGCCATTGTC
GGTGTCTCGG CGTGGACGAA ACTGGCGGGC ATCGTCATGC TGGGGTTAAT CCTTATCTCT
GTGTGGTATT GGAGCGATCA CCATGCCGTG GTCAAACAGG TGGCAAAATG GAACGCCGAT
AAATATATCA GCCTCAATAT TGGCGGCACC TTGGGCACGG CACAGGTGCT GTATATCGAC
GATGAAGAAC ATTTACATCC CTCGTGGTGG CAAAAACATC TAGCGCCAGA AGGTAACCAT
ATCAGTGGCT TGCCTTATTT CAGTGCCTTT GCCGCAACGG ATGGTAAAAA CTATTCGATG
GCTATTTGCC CCTCGATCGA TGCCAAGGAT TGTAACGGCA AGGGCATGAT CAATATCACC
TCGATTGATG CAACGCCGGC GGGCCTTAAT ATGGCCGAGT TTATCCCGCT GAGTAAGACG
ATGGAGGAGC GTATTCGCTA CAACCGCATC GTGCTGCCGA TTGATGACAA GGGTGCGGGG
GAGCTGCTGG AGCATAACTA CCACGCGGAT ATCTATTTCC CTGTGGCGGG CGAGCTGCTG
GTGCGTACGG ATCTCAGCAT GTCGCTGGTG TACGAAGGGG AGAATCGGGG TAAGTTTTAC
TCCACCTCCT GCATTACCGA TCAGGACTGT TTAACCACGC CGATTAAGTA CACTATCCGT
GGGGAGTTTG AGCAGTATCA AACGCAAATA GATGATCTGA ATGTGGATGT ATTCCATGTC
AAAGTATCTC AAAAGGAGCT CACCAAACCC GATGAGGTGA GTGGCTCTGC CATGCAGTTT
TACCGCGCGA TCCGTAAGCA CGATATTCGC GATGAAGATC TGTTTTACTA TCGGGTTTAT
CAAAATCAGG GCACTGCGGT GTGGATAGTC CCACAAATGG GGCAACTGCT GGCCTGGACT
CAGTACACTC AAGTCAAACT CTAA
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| Protein sequence | MHKITSYLML DEQAKELVDH VHGTQIGLTF SETAVLVLLL SAPNAIFTKE ELLQVGWPER
VVAPTSLTQC ISTLRKKLEP YTEVQLKTVA RRGYQLHVSE QSHVKMLAIN DADAIRDAIV
GVSAWTKLAG IVMLGLILIS VWYWSDHHAV VKQVAKWNAD KYISLNIGGT LGTAQVLYID
DEEHLHPSWW QKHLAPEGNH ISGLPYFSAF AATDGKNYSM AICPSIDAKD CNGKGMINIT
SIDATPAGLN MAEFIPLSKT MEERIRYNRI VLPIDDKGAG ELLEHNYHAD IYFPVAGELL
VRTDLSMSLV YEGENRGKFY STSCITDQDC LTTPIKYTIR GEFEQYQTQI DDLNVDVFHV
KVSQKELTKP DEVSGSAMQF YRAIRKHDIR DEDLFYYRVY QNQGTAVWIV PQMGQLLAWT
QYTQVKL
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