Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3520 |
Symbol | |
ID | 4256266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 4167978 |
End bp | 4168412 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638124204 |
Product | 3-dehydroquinate dehydratase |
Protein accession | YP_739557 |
Protein GI | 114049007 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0757] 3-dehydroquinate dehydratase II |
TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCATA AAGTTCTGCT CATCAATGGC CCCAATTTAA ACCTCCTTGG CCGCCGTGAG CCCAGTGTTT ACGGTCATCA AACCTTAGCC GATATCGTTG CCACTTTGAG TGAACAAGCT CAAGCAGCAG GTGTTGAACT TGAACATATT CAATCGAATG CCGAATTTGA GCTGATCAAC GCTATCCATG CTACCGATGC GCAGATGATC ATTATCAACC CCGCAGCCTT TACCCACACC AGTGTGGCCC TGCGTGACGC ACTGCTTGGG GTAGATATTC CCTTCTTTGA AGTGCATTTA TCCAATGTCC ACGCTCGCGA GCCCTTCCGC CACCACTCCT ATTTGTCCGA TAAGGCCATT GGGGTGATTT GTGGTTTCGG CGCCCAAGGC TATGAGTTTG CCCTCGCGGC GGCGATTAAG AGATTGAAGG CATAA
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Protein sequence | MNHKVLLING PNLNLLGRRE PSVYGHQTLA DIVATLSEQA QAAGVELEHI QSNAEFELIN AIHATDAQMI IINPAAFTHT SVALRDALLG VDIPFFEVHL SNVHAREPFR HHSYLSDKAI GVICGFGAQG YEFALAAAIK RLKA
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