Gene Shewmr7_3519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3519 
Symbol 
ID4256265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4167463 
End bp4167876 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content49% 
IMG OID638124203 
Productpeptidyl-tRNA hydrolase domain protein 
Protein accessionYP_739556 
Protein GI114049006 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAAAA TCTCAAACCG TGTGGAACTT CCGGAAAATG AAATCGAGTG GCAATTTATC 
CGCTCAAGCG GCGCTGGCGG GCAGAATGTC AATAAAGTCT CAACCGCCGC CCAATTGATT
TTCGATATCA GAAACTCGTC ATTACCCGAG TTTTATCAGC AGCGCCTGCT GCAAAAAGCC
GATCATCGGA TTACCGCCAG TGGCAAAATC ATTATCAAAT GTCAGGCGAG TCGCAGCCAA
GAGGCGAATC GGCAAACCGC ATTGGAGCAA TTTATCGCTC TGGTTGCCAG CGTGGCCGAA
GTGCCCAAAA AACGCATTCC AACCCGCGCG ACCAAAAGCA GCCAAACCAA ACGCTTAGAT
GCGAAAAAAC AACGCGGTGC CACTAAAGCC ATGCGACAGA TTAAGTTTGA TTAA
 
Protein sequence
MIKISNRVEL PENEIEWQFI RSSGAGGQNV NKVSTAAQLI FDIRNSSLPE FYQQRLLQKA 
DHRITASGKI IIKCQASRSQ EANRQTALEQ FIALVASVAE VPKKRIPTRA TKSSQTKRLD
AKKQRGATKA MRQIKFD